UFO10909.5prime Sequence
1076 bp (1000 high quality bases) assembled on 2012-01-30
> UFO10909.5prime
CAGTCGACATGAGTGACTTCAGCATCGAGTATATTTTGAACCGAGCCGGC
GACAGATACGTGGGCACCAATGCCTCCTTGGGCGTCCTGCAGCGACTCCG
TGCCAGCTTGCCTTTCCATCCGTACGCCCACCCAGCATCTTATGTCTCAA
AGGAGTCTGGAGGATCTCCTCCAGCCTCGGCTGCGGAGGCTCAGATACCC
GTCTACGATTGGCTGCAGTACACCCGGTACCATCCGCCCAAGTTGCCCAG
AGCCCTCCGCCAAAATGCGCCCGCCAAAAGGACTCCTGGTCGCCTGCCCC
GCATCCCATTTACTCCGCAGCAGCTGCAGGCCCTGGAAAATGCCTACAAG
GAGTCCAACTATCTGAGCGCCGAGGACGCCAACAAACTAGCCGACTCCTT
GGAGCTGACCAATACGCGAGTGAAGATCTGGTTCCAGAATCGTAGGGCTC
GCGAGCGACGGGAGAAGCGCGAAAAGGACGAGAGTTGCGACTCCACCTTC
TCATCGAACGCCTCCAGTCCGGAACCGGAAATGATCGTTGTAACGGCAAG
CTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATC
ATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCA
TGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAG
CGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCA
ACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTC
ATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCAT
CACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCG
CCTTGCGTATATATTTGCCCATGGTGAAACGGGGGCGAGAGTGTCATATT
GCCACGTTTAAATCAAACTGTGAAACTCACCCAGGGATTGCTGAACGAAA
ACTATGATATAACCCTTAGGAATAGCAGCTTCACGTACCCGCCAATCTGC
AATAATGTGTAGACTGCGAATCGTTG
UFO10909.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:04:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15696-RA | 681 | CG15696-RA | 44..580 | 9..545 | 2625 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 21:04:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 20847111..20847647 | 9..545 | 2625 | 99.3 | Plus |
Blast to na_te.dros performed on 2014-11-27 21:04:12 has no hits.
UFO10909.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-30 11:49:44 Download gff for
UFO10909.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15696-RA | 1..540 | 9..548 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:10:22 Download gff for
UFO10909.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15696-RA | 37..586 | 1..552 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:37:33 Download gff for
UFO10909.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15696-RA | 37..586 | 1..552 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:37:33 Download gff for
UFO10909.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 20847104..20847653 | 1..552 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:10:22 Download gff for
UFO10909.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 16672826..16673375 | 1..552 | 98 | == | Plus |
