UFO10916.5prime Sequence
1132 bp (1017 high quality bases) assembled on 2012-01-30
> UFO10916.5prime
CAGTCGACATGGCTTTGGTTTGCGTAGAGGACTTTGAAAAGAAGGCCGTT
GGGCAACTGGAGAAGAATGCCCTGGACTACTACCGTAGCGGAGCCGGTGA
GCAGTTCACCTTGGGACTGAATCGCGAGGCCTTCCGCCGGCTACGCTTGC
GACCTCGTTGTTTGAGAGATGTCTCCCGCCTGGACATTAGTACCAAGATC
TTCGGCGAGCAGATGCAGTGGCCTCTGGGCATTGCTCCGACGGCTATGCA
GAAGATGGCCCATCCGGACGGCGAGGTAGGCAATGCCAGGGCGGCCGGAA
AAGCCGGCTCCATCTTTATACTCAGCACACTGTCCACCACTTCGCTGGAG
GATTTGGCAGCCGGTGCCCCGGATACCATCAAATGGTTCCAACTGTACAT
CTACAAGGATCGTACCATAACGGAAAAGCTGGTACGTCGTGCCGAGAAGG
CGAACTTCAAAGCGCTCGTCCTGACCATCGATGCTCCAATCTTTGGACAC
CGTAGAGCCGATGTGCGCAACAACTTCAGCTTGCCGTCGCACCTGTCATT
GGCCAATTTCCAGGGCGTTAAGGCTACTGGAGTGGGTAATGCCGCTATGG
GCGCCTCAGGCATTAATGAGTACGTCTCCAGCCAGTTTGATCCAACCATA
ACCTGGAAGGATATTGCCTGGTTGAAGGGCATCACTCATCTGCCCATTGT
GGTCAAGGGAGTGCTGACTGCCGAAGATGCTGTGTTGGCCCAGGAGTTTG
GATGCGCCGGACTCATTGTTTCCAACCACGGTGCTCGTCAGATCGATACG
GTTCCGGCCTCGATCGAAGCCCTGCCGGAGATCGTAAAGGCCGTGGGAGA
TAATCTGGTGGTTATGCTGGACGGAGCATTATGCAGGGCAATGATATCTT
CAAGGCTTTGGCTTTGGGAGCCAAGACGGTCTTTGTGGGTCGTCCGGCTG
TCTGGGGATGGCCTACAATGACAGAAAGCGTGAGAGATGCTGAGTGTGCT
GAGAAGACTTTGAGAACCACCATGCGCTGATCGTGCCAATTTGGGAGACT
CACGTCGCATGTGTACATGGAAAGTCAATGGCAGCTGCCAGCCTTCTAGA
CCATTCGTTGACGCGGCAAGTAATGTCATAAT
UFO10916.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:04:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18003-RB | 1322 | CG18003-RB | 85..1147 | 8..1057 | 4975 | 98.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 21:04:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 10884103..10884702 | 412..1005 | 2720 | 98.8 | Plus |
| 2R | 25286936 | 2R | 10883631..10884035 | 8..412 | 2025 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 21:04:42 has no hits.
UFO10916.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-30 11:49:50 Download gff for
UFO10916.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18003-RA | 3425..4507 | 1..1069 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:10:37 Download gff for
UFO10916.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18003-RB | 81..1163 | 1..1069 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:37:48 Download gff for
UFO10916.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18003-RB | 81..1163 | 1..1069 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:37:48 Download gff for
UFO10916.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 10883627..10884035 | 1..412 | 99 | -> | Plus |
| 2R | 10884104..10884777 | 413..1069 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:10:37 Download gff for
UFO10916.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 6771132..6771540 | 1..412 | 99 | -> | Plus |
| arm_2R | 6771609..6772282 | 413..1069 | 97 | | Plus |
