UFO10922.5prime Sequence
1117 bp (1004 high quality bases) assembled on 2012-01-30
> UFO10922.5prime
CAGTCGACATGGGACATTCGTCAAATTTGTTTTGGTTCTTTGTTTTCGTA
TTAATCACAAAAGTATACGCCGCATTGTCCAATCCATTGTCATCAAAAAT
CGAAGTATACAATCAGCCTGAAGTTACACCCGAAAAAGAAAGAGCCAAAG
TGAGAAACTATTTCGTGCATGAGCCATACGGGCCCAACACATATTCCTTT
GGCTATGAGATTAATGATCCGCAGACGCAAAACTCTCAGTTTCGAGAAGA
AAAAAGATTTGTGAATGGCAGCATTCAAGGTAGCTACGGGTATGCAAGGC
CAGATGGACGCATTGAAGTCACCAAATATATGGCGAAAGAGGATGGCGGT
TACTCGGCCCAGATTCAGATTTTTAAAGCAGGCGATGAGAAAGTCAAATC
AGTTTGGCCCACCGAAAGACCTGATATATTAGTGGAGAGAAGCAAATCCG
ATGCTCCTTCAAATATCACCTGGGATCCAAAGAGCCATCTCAACGTGACC
GTCTCTCATGTGGCGGATCATGTGGCCCAGCAGCTGAAGCAGCAACATGG
CCTCGACCTAAACCACATCGATGTGACCAAGGATGTGCTTAAACCAGCGG
TGCTCGATGTTATCCAGGGCAAGGAACCAACTAAGGGTCGCCCTGTTCAG
AATCTAATTCCTCAGCACTTTCCCATAGTTCCCTTCCAACTGCCGGCGGA
TCAAGAAACCACCAAGGCCACCACAGCGGAGCCCCAGAAAACTGAAAGTT
CAAAATACCACAGGGCGCAATCCAACAATGCCGAGAAGGCTCAACAAGTC
GAGGAGCCGGAGGCAAGATTACCGCCACCCGGGCCACTGGTCAATAGCAG
TCCAAGCGATGGAAATTGGCAACGGCGAACCATTGAGGCAAATCGCCGTG
AATTCCTGGCCAATTTACCCAACCTAAGTGAGGCCAGGCCAGAGGCAAGC
TTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAGTGGTCATATCATA
TCATATCATTGTCTATCACAGCTAGATCTGCTGCAGCTGATCCAAAAGCG
GGACAGTCGACATCATGATCAGGCTACGATTAAGTCAGAGCTCGTACATA
TGCGGCTGCACACATCG
UFO10922.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:04:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34462-RA | 1157 | CG34462-RA | 97..1033 | 8..944 | 4670 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 21:04:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8329349..8330113 | 180..944 | 3810 | 99.9 | Plus |
| 3L | 28110227 | 3L | 8329160..8329299 | 42..181 | 700 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 21:04:23 has no hits.
UFO10922.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-30 11:49:46 Download gff for
UFO10922.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34462-RA | 1..939 | 9..948 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:10:29 Download gff for
UFO10922.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34462-RA | 90..1042 | 1..953 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:37:37 Download gff for
UFO10922.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34462-RA | 90..1042 | 1..953 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:37:37 Download gff for
UFO10922.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8329160..8329298 | 42..180 | 100 | -> | Plus |
| 3L | 8329350..8330113 | 181..944 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:10:29 Download gff for
UFO10922.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8322260..8322398 | 42..180 | 100 | -> | Plus |
| arm_3L | 8322450..8323213 | 181..944 | 99 | == | Plus |
