UFO10937.5prime Sequence
1132 bp (1001 high quality bases) assembled on 2012-01-30
> UFO10937.5prime
CAGTCGACATGTCCCAGATAAACAATATATTCATTAAGCTGCGAGCTCGT
CTGCGGGAGCGTGATATCAAGTTGTGGGAGGAGCCCTACTACTTCGAGGA
GGTGGGCAGCATCGAGTCGGAGATGGACCGCCTGGCCAGGGACATCAGTG
GCGAACTGGGCATCAGTGTGTCGGACTGCAGAATTGCCTTGGGCGAATTG
CAAGATGGTGCCTTGAGGAAGCTGGCGGCTCGCCGAGAGTTCAATGACAC
CGGATTGGCCACGTTCAATGTGCGGTGTGTGGACAGCAAGGGTGGCACCG
TGCAAATGCTGGAGATCAAGTGTTCGCTGGGTGGACTGGGCTCGGATCTG
CAAGCTGAGGTGGCCAAGAAGTTGGATATCGTTGATTCCAGTCATGTGAA
ATGCATCTCCGGAGGACGCATCATCAATGGGCAGAAGACACTGGCCTCGC
AGGGGCTCAAAACCAATCAGCACCTCATGGTGGTTGTGGGTGGAACTAAT
GAAGGTCAGGAGTTGCACGAACGTATCCAAAGGATTCGTGCGGACTTGGA
GTTAGTTGCGGATGCAGATCGCTTTATGGAAATGGAGGATCAAGATGGAC
GTCCAATTTTCTTGCCACGCGAGGAAAATCGATCCCTATTGATGGCCATG
AGCATGTACGAAGTGGCCAGAGTTGCCATGCATAAGGAGAACTTCGATGA
GGCTCTACTCATCCTACTCGAGGCCGATGAACTCTTCTCCCAATGTGACT
CAAAGCTCCTGGAAGGAGTGGATAACTATGCCTTAATCAATCTAGATATT
GTTTGGTGCTATCTGCGCCTGAAGAACATCACCCAACTGCCAGATGCACA
GCGACGTTTGGATATTTGCGAGAGGGGCTTTGTCAAGAGCTATGGCGAGC
AGTTCATCCGATTGTTCTCGATTAAGGTTCCAAGTAGCCCGGAACGAGCT
TTGATCATGAGACTGCACCTGCTCCAAGGTGTGCCTCCTCTTTCACCAAA
TCCCCGGGATGAGCCTACGAAAAACTGGAGGTGGCGGAACAAGGACTTGT
ATGAGTCAAGATGATGACCCTGACTAAGCACTTCTCGTGAATGGACCTAT
GAGAATCGAATGCAGTTGCCTGAATCCTGTGC
UFO10937.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:05:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5111-RA | 2005 | CG5111-RA | 88..1198 | 7..1113 | 5095 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 21:05:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 25506362..25507410 | 7..1055 | 4920 | 98.8 | Plus |
Blast to na_te.dros performed on 2014-11-27 21:05:00 has no hits.
UFO10937.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-30 11:49:53 Download gff for
UFO10937.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5111-RA | 79..1179 | 1..1094 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:10:49 Download gff for
UFO10937.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5111-RA | 79..1179 | 1..1094 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:37:57 Download gff for
UFO10937.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5111-RA | 79..1179 | 1..1094 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:37:57 Download gff for
UFO10937.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 25506353..25507453 | 1..1094 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:10:49 Download gff for
UFO10937.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 21332075..21333175 | 1..1094 | 97 | | Plus |
