UFO11010.5prime Sequence
1148 bp (1024 high quality bases) assembled on 2012-02-08
> UFO11010.5prime
CAGTCGACATGGAGAAGGATCTGGGTGAGGAAAAGGACCAGGATCAGGAG
CAGAACACTGAGATGGAGCCCAAGCAGGAGATGGACGTGGCGCAGTCTTA
CATAACGCGGGCCAAGATGAATCCTGCCAAGAAGGATAACGAGAAGCGAC
GACGCAAGGATGCCATGCGAAGGGTCTCGATGATACTGCGAAAATGCGAC
TCCATGCGCACGACGGAAGATCGACAGTTTTTGGAGAAACACCCGGACAT
GGTGAAGACGACCAAGAAGCGCAAGGAGCGGGTAGAGATATACAAGGAGC
GGGTTGTGGAACGCGAGGATGCGCCGCACGTGATCGAGGCGAAGGTGGAG
CAGTTGGCCAACATCATTTCGCAGGCTAAGCATCTAGTTTGCTACACGGG
AGCCGGTATAAGCACGGCAGCCCTGATTCCGGACTATCGCGGTAGCCAGG
GAATATGGACACTGCTCCAAAAGGGTCAGGACATCGGCGAGCATGATCTA
TCCAGCGCGAATCCCACCTACACGCACATGGCACTTTATGAGCTGCATCG
CCGCAGATTGCTGCATCATGTGGTCTCCCAGAATTGTGATGGCCTGCACT
TGCGATCCGGATTACCGAGAAATTCGTTGTCCGAAATCCATGGAAACATG
TACGTGGAGGTGTGCAAGAACTGTCGACCGAACAGCGTTTACTGGCGCCA
GTTCGACACCACGGAGATGACTGCCCGCTATTGCCACAAGACCCACCGCC
TATGCCATCGCTGCTCGGAGCCTTTGTACGACACCATTGTGCACTTCGGA
GAGCGGGGGAACGTCAAGTGGCCATTTGAACTGGGCGGGAGCCACTGCCA
ATGCGCAGCGAGCGGATGTGATTCTCTGCTTGGGCTCCAGTCTCAAGGTA
CTCAAGAAGTACACTTGGCTTTGGCAGATGGACCGGCCTGCCCGCCAGCG
AGCAAAGATCTGTGTGGTTCAACTTGCAGTGACGCCCAAGGATGCGATTG
CTAGCATAAAGATCATGGGAAATGCCGATCAGGTGATGGCCAATTTGATG
CATTCTACCTCCAATTCAGTTTCCCGTTTACACGTAAAGAAAAGATTCGG
ATTTTCGCAATGCCTTGCTTTCTGATGCCGGAGGACTTGCCCACGTCT
UFO11010.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:05:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sirt7-RA | 3058 | CG11305-RA | 217..1351 | 8..1145 | 5210 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 21:05:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 29056528..29057497 | 173..1145 | 4170 | 96.4 | Plus |
| 3R | 32079331 | 3R | 29056143..29056310 | 8..175 | 840 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 21:05:03 has no hits.
UFO11010.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-02-08 10:10:27 Download gff for
UFO11010.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sirt7-RA | 206..1310 | 1..1109 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:10:50 Download gff for
UFO11010.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sirt7-RA | 211..1315 | 1..1109 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:37:59 Download gff for
UFO11010.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sirt7-RA | 211..1315 | 1..1109 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:37:59 Download gff for
UFO11010.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 29056137..29056308 | 1..173 | 97 | -> | Plus |
| 3R | 29056529..29057461 | 174..1109 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:10:50 Download gff for
UFO11010.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 24881859..24882030 | 1..173 | 97 | -> | Plus |
| arm_3R | 24882251..24883183 | 174..1109 | 98 | | Plus |
