Clone UFO11029 Report

Search the DGRC for UFO11029

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:110
Well:29
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG32391-RB
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO11029.5prime Sequence

1122 bp (1027 high quality bases) assembled on 2012-02-08

> UFO11029.5prime
CAGTCGACATGCGTCTTCATTGTGATAGGATTTGTTCACTGGATCCTGGT
GCTAACCTTGCTGCACGAATGGTTTCTGGTCTTGGTAAACGAGCACTCAT
CTGCATTGCTCCTAGCCTTTGTATTTGGCATTTTCCTACTTTTCCTGTTT
GCCCTAAGTATGCCGCTAAGGAAAATGTCCTGTGTCAACTGGCTGATTAC
GTTTATTATCTTTCTCTCAGTGTGCTGATCATATCATCGGGAGTACTTTA
TATGCTTGCCGGATTTCTGATTGTCAGCCTTGCATTTGTGTTATGTACAC
TTATAGCTGCTTTAATGGCGTATGACCTCACAGGCACCGGACTCTACCTA
TATGCCCTTGCAACTGGCACTTACTCACTGAGCATATACTCCCTGGTATT
GTATGTGGTTCTCGACGTGATCTGGGGATTTTATCTCTTCGCATTCTGTA
TCGGCTGTGTGGTGATGATGTTCCTGATGTATCATGTGCAGTGCATCATG
GGCGGAAGAAGGGCCTCGACCAAGTTGTTCGATGACAAGTTCGCCGCCCT
GCTGCTGTTCCACGAGTTCATAGGCCTCTTTGTGCTAACCCTCTACTGGC
GGCCCATAATGCATCGCCTGCAGTTGAACAAGCAAGCTTTCTAGACCATT
CGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCAT
AATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGT
ATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAAT
CCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGC
GAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTT
GTAATTCATTAAGCATTCTGCCGACATGAAGCCATCACAAACGGCATGAT
GACCTGATCGCAGCGCATCAGCACCTTGTCGCTTGCGTATATATTTGCCC
ATGTGAAACGGGGCGAGAGTGTCCATATGCCACGTTAAATCAACTGTGAA
CTCACCCAGATGCTGAAACGAAAACAATTTCTCATATCCTTAAGAATGCA
GTTCACGTAACCGCCACTTGCA

UFO11029.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:06:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG32391-RB 748 CG32391-RB 91..710 9..628 3100 100 Plus
CG32391-RA 751 CG32391-RA 91..713 9..628 2725 95.4 Plus
CG14823-RA 2098 CG14823-RA 884..1042 628..470 795 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 21:06:15
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 7068249..7068407 628..470 795 100 Minus
3L 28110227 3L 7068471..7068621 470..320 755 100 Minus
3L 28110227 3L 7068854..7068998 210..66 725 100 Minus
3L 28110227 3L 7068674..7068783 320..211 550 100 Minus
3L 28110227 3L 7069051..7069107 65..9 285 100 Minus
Blast to na_te.dros performed on 2014-11-27 21:06:16 has no hits.

UFO11029.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-02-08 10:10:49 Download gff for UFO11029.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32391-RB 87..714 2..635 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:11:50 Download gff for UFO11029.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32391-RB 87..714 2..635 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:38:46 Download gff for UFO11029.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32391-RB 87..714 2..635 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:38:46 Download gff for UFO11029.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 7068241..7068406 471..635 98 <- Minus
3L 7068471..7068620 321..470 100 <- Minus
3L 7068674..7068783 211..320 100 <- Minus
3L 7068854..7068998 66..210 100 <- Minus
3L 7069051..7069111 2..65 93   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:11:50 Download gff for UFO11029.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 7061341..7061506 471..635 98 <- Minus
arm_3L 7061571..7061720 321..470 100 <- Minus
arm_3L 7061774..7061883 211..320 100 <- Minus
arm_3L 7061954..7062098 66..210 100 <- Minus
arm_3L 7062151..7062211 2..65 93   Minus