UFO11030.5prime Sequence
1135 bp (1034 high quality bases) assembled on 2012-02-08
> UFO11030.5prime
CAGTCGACATGAAGCGAATTGTGCCACTTTCAGCAGACTTATTAAGTGAC
ATAATGACCCACCGGAATGAGTATCACACACCACCTGGGCATTATATAGA
GGCAGAACAAGTGGGTGATAACAGAGGACTATATGCGGCAACCAGTTCCC
CCCAATTCTTGCCATCGGATGCGAGGCAACGCACTGATGGATTTGCCGAT
GGACCCATTGTGGCGACCACTCCCGTTTCAGAACTGACACCCAGTGAGGT
ACTGACCAGACTTGAGGCACGCCTGGATTTCTTGGCGGCGGAAGTGCAAG
AACTGCGCAAGTTGATACCTAAACCAATCAATCAGAATGAGGAGCCCTGC
ACGAGCGGGTCATATGGCTTAAAGCGCTCTCAATCCGATCTATCGTTGAT
CCTTAAGTCGAGCTCGGACCTGAGACTCATCAATTCCTCCAACGATCTGC
ATCTGCGAGGGGAGCAGTCGCTGGACAAACGCAATCGCAAGGGGCAGTTG
TACCGCGACATGCAGATGCATCTGACCAATATGATAGTCGTGCCCAAGTC
ACGCACCTCACTGTTTCTCAACCAGCGAAAGGAATTGAACTCCCAATTGT
GCCATTGGCGGCATCAATATTCGGATGAGGATTGGATGCAGAATTTCCAG
AGCAGCTCCACGGAGGCCGAGCGGCGCTTCAAGAATGTGCGTCGTCAGGC
AAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATA
ATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGG
TCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACC
GAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGTCATTACTGGATCTAT
CAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCAC
TCATCGCAGTACTGTGTAATTCATAAGCATTCTGCCGACATGAGCATCAC
AAACGCATGATGACCTGAATCGCAGCCGCATCAGCACTTGTCGCTTGCGT
ATATATTTGCCATGTGAACGGGCAAAAGTGTCATATGCCACGGTTAATCA
ACTGGGAACTACACAGGATTGCTGAACGAAACATT
UFO11030.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:06:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15260-RB | 814 | CG15260-RB | 67..756 | 9..698 | 3450 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 21:06:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 15291484..15292173 | 698..9 | 3450 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 21:06:18 has no hits.
UFO11030.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-02-08 10:10:50 Download gff for
UFO11030.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15260-RB | 62..762 | 1..703 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:11:52 Download gff for
UFO11030.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15260-RB | 62..762 | 1..703 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:38:49 Download gff for
UFO11030.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15260-RB | 62..762 | 1..703 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:38:49 Download gff for
UFO11030.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 15291478..15292177 | 1..703 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:11:52 Download gff for
UFO11030.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 15291478..15292177 | 1..703 | 99 | | Minus |
