UFO11034.5prime Sequence
1165 bp (1042 high quality bases) assembled on 2012-02-08
> UFO11034.5prime
CAGTCGACATGAACTCCTACGACCCACAGGACACAGCTTCTCAACAGGAG
GAATCCGTCGCGCTGAAGGGCCACTTCTACGGCGTCTATTTGCTATGCAG
TCAGAGCTTGGATCCTCGCTACCGGGGAAAATGCTACGTGGGCTTCACCG
TGAACCCCAAACGGCGGATACGCCAACACAATCTTGGTTGTGATTTCGGT
GGCGCGAGGAAAACCAGTCGCAAAGGGCCGTGGCTGATGGTAATGATCGT
GCACGGATTCCCGAATAATACAGTGGCACTCCAGTTTGAATGGGCTTGGC
AACAGCCGTCGCTTTCAACTAGGCTTAAAATGTACCCTGAATTAAAACGA
AAACTGCCCAGGGAGACGTTCTTTGACTACAACTTTAGGATCCTTAGTAA
TATGCTGGGGGTTGGCCCTTGGAATAGATTACCGCTCACCGTTCGCTGGC
TAGAAACGGATTACGAGAGGCCATTCAGCAAGGCACTGCCTAAACACATG
GAAATTGTGAGTGGCAAGGTTTCCATTAGTGCCTCACAACGTAGGAGACC
TGATGATGCAGTACCTCCTCCACCTGTGGCGTGGGCTTCCGAGTGCCACC
TTTGTATGCAGGAAATGGAGCAACCGGAGAAATCCCGCCTGGGATGCACA
AATCAAATGTGTCGGCTGACATGCCATATGGTGTGCCTGGCCAATTACCT
TCTGGGCGACGAGCCAGGTCATTACATCCCAGTTGGAGGAGAGTGTCCGC
TTTGTGAGACTCGTCTCAGCTGGGCAGCACTGCTGCAGCGCAAACGTCTT
CTTTTGGGCGTGCCTGAAGAACTGCAGGATCATGACGAGGATCTGAGCGA
CGACATTGATGTAGACAGCGATATTGAAGATACCCCGGAGCTCAGCGATG
CAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCAT
ATCATATCATATCATAATCATAATCACACTAGCCTAGGAGATCCTGTCAT
GACTAGTGCTTGATTCTCCACCAATAAAAACGCCCGGCGCACGAGCGTCT
GAACCATTCGAATGGAGTTCTGAGTCATTACTGGATCTATCAAAGGAGTT
CAAGCGAGCTCGAATCAATACGCCCGCCTGCATCTCTCCGAGTACTGTGT
GGTATTCATTAAGCA
UFO11034.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:06:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| slx1-RB | 1139 | CG18271-RB | 34..924 | 9..899 | 4455 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 21:06:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 4643543..4644421 | 21..899 | 4395 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 21:06:00 has no hits.
UFO11034.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-02-08 10:10:44 Download gff for
UFO11034.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18271-RB | 15..918 | 1..907 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:11:37 Download gff for
UFO11034.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| slx1-RB | 26..929 | 1..907 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:38:36 Download gff for
UFO11034.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| slx1-RB | 26..929 | 1..907 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:38:36 Download gff for
UFO11034.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 4643533..4644426 | 10..907 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:11:37 Download gff for
UFO11034.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 469255..470148 | 10..907 | 99 | == | Plus |
