UFO11042.5prime Sequence
1140 bp (993 high quality bases) assembled on 2012-02-08
> UFO11042.5prime
CAGTCGACATGAGTAAAAAATCGCTTAAGAGGCAAGATGAGCACACAAAA
GATAATGATTGTGAGGAAGAAGACGAGGAGGAATTACAGGCGGCAATTAG
GGAAATGGTCAAGATTCCCGATATTGATATAATACCCAGAAAGAGTAGCG
AAAGTGTAAGGGAAAAAGAGTCGACTGGAAATGTACTTAAGAAAAATCAT
GATGAACGTGGATCGCAAACGGGTGATGGAAAAGATACAACTTCAAAAAC
GAGGCAAAAGAAGTTAGAAAGCGATGATAGTTGGGCAGCACTTCTTCGGA
AAAGGTTTGCTTGGACAAAGGACAATAAAACGGATGCAGTTAATCAAAAT
ATACCTAATACTAAAGGGTCCTCAAAGGATTTTACAGAAAATAAAGGAAG
TGGAAACAAACATTCTACAGTTACCTCTAACGAAAAGCTGATACGATCGG
AATATTATGAGAATTCTCAAACAAAATCTGATGCAATCAAATCACTTTCA
AATAATCAGTTGAGTGAAGAATCGCCGGAGTTTCTGAACAAATTAAGACG
AATCGAAGAGGCATCGAAGCCTAAAACTTGGAAGAGGCCAACGCCAGTAG
TTTTGAAATCAAATCAAAATTATTCCGCCAACAAAAACAGTGAAAATGCG
TTGGATGCGAAGCCACAAACTGCTACGAATACTGAAGAAACGCATGGGTG
TATAAATATTTTAAAGGTTCCCTTCCAAAGCAATTTATATTATGTTCCAG
AAAAGCCATCACGCCAGGATAAGGGGTTCTGGAACTTCGGACTTTCACCC
AGGAGCTCCGGAAACACCAATTGTTGAAAACTCCGCGGTGGACTCCGATC
GAAAAGGCGTTGAAATTATGCCAGAAATGTAAAAAATTCGGAAGAGAAAA
AAATTGACAATTCCGATTCGACGAAAACTGTCACATTACAGGACATTCGC
TATACCGCCAAATGGGACGGCCACTGTCATTCCAGAGAGGGAAACCTGGT
TGTTGACAAGGCGCCAAGGCAAGTTAAATATCCGCCTGCATTCTGGGCAC
CAACTTTCCTGAACTCGAAGCATCGGGAGCATTGTGTCAATAGCCTGGCG
ATGCACAGAATGCCCGCCTATTGGCGTGACGATCTGGCCC
UFO11042.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:06:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ZnT33D-RC | 2264 | CG31860-RC | 79..1215 | 9..1139 | 4915 | 96.5 | Plus |
| ZnT33D-RB | 2257 | CG31860-RB | 79..1215 | 9..1139 | 4915 | 96.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 21:06:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 12164319..12165418 | 9..1102 | 4610 | 96.6 | Plus |
Blast to na_te.dros performed on 2014-11-27 21:06:46 has no hits.
UFO11042.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-02-08 10:10:57 Download gff for
UFO11042.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31860-RC | 79..1193 | 9..1117 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:12:09 Download gff for
UFO11042.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31860-RB | 79..1193 | 9..1117 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:39:07 Download gff for
UFO11042.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ZnT33D-RB | 79..1193 | 9..1117 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:39:07 Download gff for
UFO11042.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 12164319..12165433 | 9..1117 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:12:09 Download gff for
UFO11042.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 12164319..12165433 | 9..1117 | 96 | | Plus |
