UFO11047.5prime Sequence
1111 bp (1032 high quality bases) assembled on 2012-02-08
> UFO11047.5prime
CAGTCGACATGAAAGGTTTTCAGATAATCGGATTACTTGGATTGTTTGCA
CTCCTTGTAAGTGGATCGACCTCGTCTGGAGAAGATACCAACATCAAACT
AACAACAGACGAATCTACTACTGTGGAGGATACCACGGAGGTTTTAGTCA
CAACACTACCACCTCCAGTCCTGTGTGCTGATGAAGATCTGTTTCTCCCA
GCACCCGACTGCAGAGAGTATTATCAATGCCTGTACGGTGAGGGAATTTT
AAAGATATGTCCAGACGGCCTCTATTGGGATCGGGAGCTGAATGTTTGCG
CCTGGGACTCACAGCATTGTGCTGATGACAAGAACGAGACCACCACACCA
TCGACCTTGAATTGCGCATCCGGGTTACCATTTTTGCCCTATATACCGGA
CTGCACTAAGTTTATCCAGTGCGTCTACAATATTGGCTTTAAACTAAGCT
GCCCGAGTGGTTTGTATTGGAACCAACCTCTTCAATCGTGTGACTATACC
TGCGATAATGCGATTGAGTTCTCTGGCGCACACCAAGTGCAAGCAAGCTT
TCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATA
ATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGA
CTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGT
TCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACA
GGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATC
GCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCAC
AAACGGCATGATGAACCTGATCGCCAGCGGCATCAGCACCTTGTCGCCTT
GCGTATATATTTGCCCATGGTGAAACGGGGGCGAAGAGTTGTCCATATTG
GCCACGTTTAAATCAAACTGGTGAAACTCACCCAGGATGCTGAACGAAAA
CATATTTCTCAATAACCCTTTAGGGAATAGCCAGTTCACCGTAACACGCA
AATCTGCAATATATGTGTAGAACTGCCGAATCGTCTGGTTTCACTCGAGC
GAATGAACGTT
UFO11047.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:06:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42397-RA | 651 | CG42397-RA | 35..570 | 7..542 | 2680 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 21:06:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11973166..11973695 | 542..13 | 2650 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 21:06:30 has no hits.
UFO11047.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-02-08 10:10:53 Download gff for
UFO11047.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42397-RA | 35..573 | 7..546 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:11:58 Download gff for
UFO11047.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42397-RA | 35..573 | 7..546 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:38:57 Download gff for
UFO11047.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42397-RA | 35..573 | 7..546 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:38:57 Download gff for
UFO11047.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11973166..11973695 | 13..542 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:11:58 Download gff for
UFO11047.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11966266..11966795 | 13..542 | 100 | | Minus |
