UFO11050.5prime Sequence
1115 bp (1017 high quality bases) assembled on 2012-02-08
> UFO11050.5prime
CAGTCGACATGGATCCACTCCGCCGTAATCCTCTTTTGGAAATTACCAAA
TGTGAGATGTGCTCCAATTTGGTATACCATTTTCCGACTGGATTGTGTGC
CCGCTGCTTAACTCTTTGGGCCGGAAAGAAACCAATGGACGGACTGAGAC
TGACCGTGGACCAATCGAAGGCTTTCCTTGTGAACATTGCTCGCTGTTCG
GATGCCCAGGATAAGAGCCATATGGACCCCACCTTTCAACGCGTGATTGC
CGAGGTGAGATTGCAGCGCCAACAGAAACTTGAGCTGTTCCAGAAGATTC
GCCAGCAGTTACAGCTTTCCGTACTCACCGGTTCCTTCTATGACAAAAAT
CCAAAATACGAAGTCAATGAGGACTATTGGAATATACCGGATATCGTCGA
TGCAGACATGCTGATGTTTCAGAAAAATATTGACCTGCTTGCAGATATAC
CCACCATTTCGTCAGAGATCAATGACGAAAATAAATACAATAAGCGCGAA
AATAGAAAACGAAATTTGGCAAGCTTTCTAGACCATTCGTTTGGCGCGCG
GGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACA
ACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATA
AAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTC
TGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCA
AATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAG
CATTCTGCCGACATGGAAAGCCATCACAAACGGCATGATGAACCTGATCG
CCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTG
AAAACGGGGCGAAGAAGTGTCCATATGTCCACGTTTAAATCAAACTGTGA
AACTCACCCAGGATTGCTGAACGAAAAACATATCTCATAAACCCTTAGGG
AAAAAGCAGGTTCACGTACACGCCAATGTGCGAATATATGTGTAAACTGC
GGAATCGTCTGCATTCACTAGAGCGATGAAACGTTCCGTTGGCTCATGAA
ACGGTTACAGGGGAA
UFO11050.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:07:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34302-RB | 825 | CG34302-RB | 213..722 | 9..518 | 2550 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 21:07:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 9823102..9823611 | 518..9 | 2550 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 21:07:09 has no hits.
UFO11050.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-02-08 10:11:02 Download gff for
UFO11050.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34302-RB | 209..731 | 1..530 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:12:24 Download gff for
UFO11050.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34302-RB | 209..731 | 1..530 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:39:17 Download gff for
UFO11050.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34302-RB | 209..731 | 1..530 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:39:17 Download gff for
UFO11050.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 9823102..9823615 | 1..518 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:12:24 Download gff for
UFO11050.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 5648824..5649337 | 1..518 | 99 | | Minus |
