UFO11064.5prime Sequence
1143 bp (1006 high quality bases) assembled on 2012-02-08
> UFO11064.5prime
CAGTCGACATGTTTCCCACCTATTCGATCAATGATGTCGCCGCCAATGAG
GAAGTAGATCATACCCAGCAAGACTTATCTTCAAAAGTCGAAGCCGATAT
GCAGTCGATCATTCGTTTGGCCTACCAGGAGAACGAGGCTCTGATCCACC
AAAAAGTTATGAGCGCGATGAAGCAACGCGAAGAGGAGTTGGCCAAGCTG
TGGGATATTCGATCATCATTATCAAGCTTAGCGCAGATCAGGGCTGCTCG
TGATGAGGAACTAAGAGCTCTATTGGACCAAATCGTTTCGAATGCGGACA
GTAGCGATGAAGATGAAGAAAAGGAAGATCCCTTTGCAAGCTTTCTAGAC
CATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAA
TCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGC
TTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAAC
AAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCC
AAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTAC
TGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGC
ATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTAT
AATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCC
ACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAA
AAACATATTCTCAATAAACCCTTTAGGGAAATAGGCCAGGTTTTCACCGT
AACACGCCACATCTTGCGAATATATGTGTAGAAACTGCCGGAATCGTCGT
GGTATTCACTCCAGAGCGATGAAACGTTTCAGTTTGCTCATGGAAAACGG
TGTAACAAGGTGAACACTATCCCATATCACCAGCTCACCGTCTTTCATGC
ATACGAAATCCGATGACATCATCAGCGGCAGATGTGAATAAGCGATAAAC
TTGTGCTTATTTTTCTTTACGTCTTAAAAGCGTAATATCAGCTGACGCTG
TTATAGTACATGGACACTGACTGAATGCCTAAAGTTTCTTACG
UFO11064.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:07:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42810-RA | 503 | CG16849-RA | 136..462 | 9..335 | 1635 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 21:07:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13459816..13460142 | 9..335 | 1635 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 21:07:47 has no hits.
UFO11064.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-02-08 10:11:11 Download gff for
UFO11064.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42810-RA | 44..373 | 9..339 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:12:46 Download gff for
UFO11064.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42810-RA | 44..373 | 9..339 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:39:38 Download gff for
UFO11064.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42810-RA | 136..465 | 9..339 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:39:38 Download gff for
UFO11064.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13459816..13460142 | 9..335 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:12:46 Download gff for
UFO11064.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13459816..13460142 | 9..335 | 100 | == | Plus |
