UFO11067.5prime Sequence
999 bp (899 high quality bases) assembled on 2012-02-08
> UFO11067.5prime
CAGTCGACATGCCGCTGCGCAAGAAAGAGGACTACATACCCATTAAGTGC
GAGGGCTGGAACGGCAAGTTCGTGTATCCGGATGGAGCTGTCAATAATGT
GTCCAAGATACGTCGCCAGAACCAGAACGTAACCAATACCAACAACTTCT
ACGGATTCAACACGGAACCCATTGTCCTGCCCACCGAATGGGATGGCACC
TTCGTGAAGAGTGGCGAGACCCGCATCAAACAGGAGCGCAATCGATCCGA
TGACCAGGACTACTTTGATTACAACACCGAGCCCACGGTACTGCCCACCA
CTTGGAGTGGCGAGTTCGTCAACGATCCCAACGATGTGCGCATTAAGCCG
GAACGCAACTTCTCGGATGCCAGGGATTATGCAGAGGCATCCCGATTCAA
ACTGGTCCAGCACGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCC
AGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAG
CCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAA
CGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGG
TCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTA
CGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCTTTC
TGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGC
GGCATCAGCACCTTGTCGCCTTGCGTATTATATTTGCCCCATGGTGAAAA
CGGGGGCGAAGAAGTTGTCCATATTGGCCCTCGTTTAAATCAAAACTGGT
GAAACTCACCTAGGGATTGGCCTGAGACAAAAACATATTCTCAATAACCC
TTTAAGGAAATACGTCAGGTTTTCACCGAAACACGCCCTTCTTGCGAAAT
ATTGTGTAGAAACTGCCGGAAATCCGTCGTGTATTCACTCCGAAGCGAT
UFO11067.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:07:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42808-RA | 640 | CG13335-RA | 76..480 | 9..413 | 2025 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 21:07:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 13573778..13574182 | 413..9 | 2025 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 21:07:56 has no hits.
UFO11067.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-02-08 10:11:13 Download gff for
UFO11067.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42808-RA | 61..465 | 9..413 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:12:52 Download gff for
UFO11067.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42808-RA | 76..480 | 9..413 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:39:44 Download gff for
UFO11067.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42808-RA | 76..480 | 9..413 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:39:44 Download gff for
UFO11067.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 13573778..13574182 | 9..413 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:12:52 Download gff for
UFO11067.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 9461283..9461687 | 9..413 | 100 | | Minus |
