UFO11069.5prime Sequence
1135 bp (1032 high quality bases) assembled on 2012-02-08
> UFO11069.5prime
CAGTCGACATGGGCATCGAGATGAGGTGTCAGGACAGGAGGATCCTGCTA
CCTAGCCTACTCCTACTAATCCTTATGATCGGCGGTGTCCAGGCCACCAT
GAAGTTGTGCGGCCGCAAACTGCCCGAAACTCTCTCCAAGCTCTGTGTGT
ATGGCTTCAACGCAATGACCAAGAGAACTTTGGACCCCGTGAACTTCAAT
CAGATCGATGGCTTCGAAGACCGTTCCCTGCTGGAAAGACTGTTGAGTGA
TAGTTCGGTTCAGATGCTCAAGACTCGACGTCTTCGGGATGGAGTCTTCG
ACGAGTGTTGCCTGAAGTCGTGCACCATGGATGAGGTGCTGAGATATTGT
GCTGCCAAGCCGAGAACGGCAAGCTTTCTAGACCATTCGTTTGGCGCGCG
GGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACA
ACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATA
AAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTC
TGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCA
AATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAG
CATTCTGCCGACATGGAAGCCATCACAACGGCATGATGAACCTGAATCGC
CAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGA
AAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAACTG
GTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAATAAA
CCCTTTAGGGAAATAGGCCAGGTTTTCACCGTACACGCCACATCTTGCGA
ATATATGTGTAGAAACTGCCGGAATCGTCGTGTATTCACTCCAGAGCGAT
GAAAACGTTTCAGTTTGCTCATGGAAACGGTGTACAGGTGACACTATCCC
ATATCACAGCTCCACCGTCTTTCATGCATACGAAGTCGATGACATCATCA
GGCGGCAGATGTGAAAAGCGGAAAAACTTGGCTTATTTTTCTTTACGTCT
TAAAAGGCGTAATCAGCTGAACGGCTTGTTAAGGT
UFO11069.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:08:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ilp3-RA | 751 | CG14167-RA | 71..431 | 8..368 | 1805 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 21:07:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9801618..9801803 | 368..183 | 930 | 100 | Minus |
| 3L | 28110227 | 3L | 9801875..9802050 | 183..8 | 880 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 21:07:59 has no hits.
UFO11069.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-02-08 10:11:14 Download gff for
UFO11069.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ilp3-RA | 64..438 | 1..375 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:12:55 Download gff for
UFO11069.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ilp3-RA | 64..438 | 1..375 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:39:46 Download gff for
UFO11069.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ilp3-RA | 64..438 | 1..375 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:39:46 Download gff for
UFO11069.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9801875..9802054 | 1..183 | 97 | | Minus |
| 3L | 9801618..9801802 | 184..368 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:12:55 Download gff for
UFO11069.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9794718..9794902 | 184..368 | 100 | <- | Minus |
| arm_3L | 9794975..9795154 | 1..183 | 97 | | Minus |
