UFO11073.5prime Sequence
1156 bp (1045 high quality bases) assembled on 2012-02-08
> UFO11073.5prime
CAGTCGACATGAATCTTTTGTGGGCTATAGTGATTGTGGCCGAACTGAAA
TGTCATACGGGCCATACTGTATTCCGAACTCGATGGCCCACATATGTACA
GAAAAAACACTATAATATTCCAGTAAAGCCACCCGATTACTGCAATGCAG
ACATTTGTCCGGCCAACAAGAAGCACATCACCTGCGGCTTCAAATTTTGG
TCTACGAAATGCGGTAGAAATCACGAGGGCGTCAGGATGAGCGATTATCG
CTATGATATCGTGAGGAATGTGAACAACTTTCGACGGAAGTTGGAATGGG
GCCTGGGGAATCTGCCCAGAGCGGTCAAATTTAAGAACATCAAGTGGGAC
GATGAGCTGTCGGTGATGGCGATGCGGGTCTCTAATCAATGCTTGCAGCA
CACTTTCTCACCCTGCGTGAATACGTTCCTCTACAAGGATGTGGGCGAGT
CCTCAGATTTCGTCAAGGTGCAGAACACTTCCAAGGGCTTCAACGTGATC
AGCTTCCTGAATATGTGGTTCGAATACCACAAGATGATGAAGCCCAGCTA
TGTGAACAACTTTCCCAATATAGCCCCTCAGGATCGGCTCATTATCTTCG
CCAATCTGATCTACGAGAAGAACAAGAAAATGGGCTGCGGAATGGTGAAG
TCGGGGCAGGGGCGCTTCCTGACCTGCCTCTTCGATAAGAAAATCAAGCC
AAACCAGAAGCTTTACACCACTCGGTTGAATGATCCATTTCGCACAAATC
GGAAAACAAACGAAACAGAATCGATCCAATCGAATAGTAGTAGCACAGAA
GCAATTGTAAATTTGAACACAGCGTATAAAGCAAGCTTTCTAGACCATTC
GTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATA
ATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGAT
TCTCACCAATAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCAT
GATGGAGTTCTGAGTCAGTACTGGATCTATCAACAGGAGTCCAAGCGAGC
TCGAATATCAAATACGCCCCCGCCCTGCCAGTCATCGCAGTACTGATGAA
GTCATAGCAATTCTGTCGACTGAAGCAATCCAACGGCATGTAGTGAACCT
GAAATT
UFO11073.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:08:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11977-RB | 857 | CG11977-RB | 5..826 | 9..830 | 4110 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 21:08:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 8998015..8998647 | 198..830 | 3165 | 100 | Plus |
3R | 32079331 | 3R | 8997701..8997820 | 9..128 | 600 | 100 | Plus |
3R | 32079331 | 3R | 8997878..8997951 | 124..197 | 370 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 21:08:12 has no hits.
UFO11073.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-02-08 10:11:17 Download gff for
UFO11073.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11977-RB | 3..826 | 7..830 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:13:03 Download gff for
UFO11073.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11977-RB | 3..826 | 7..830 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:39:54 Download gff for
UFO11073.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11977-RB | 3..826 | 7..830 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:39:54 Download gff for
UFO11073.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 8997701..8997820 | 9..128 | 100 | -> | Plus |
3R | 8997883..8997951 | 129..197 | 100 | -> | Plus |
3R | 8998015..8998655 | 198..839 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:13:03 Download gff for
UFO11073.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 4823423..4823542 | 9..128 | 100 | -> | Plus |
arm_3R | 4823605..4823673 | 129..197 | 100 | -> | Plus |
arm_3R | 4823737..4824377 | 198..839 | 99 | -> | Plus |