UFO11075.5prime Sequence
1160 bp (1038 high quality bases) assembled on 2012-02-08
> UFO11075.5prime
CAGTCGACATGTCCAGCGACGCCAATACGGCCGTGCTGCGCAACTGCATC
CGCTTGCCGCTGGCGGAGGATGAGCTACTGGAGGTGACGGCCAAGGCCAA
GGATTATGCCATTATGCACGGCGCCGCCATGCGATCGAAGACGGCCTTCA
GTCCGGACTCGTTGAATTTCGCCCCCTTCGTGCTGGTGCCTTCCTCGTTT
CCGCGCAAGGAGTTCGAAAAGGCGGTGGCCCTACAGCCGATCATCAACCG
GCTGATGCACAATGTGGCCCACGACGAGGAGTTCATCACGACGACGCTGG
CGGAGACGATCAAAGTGGACGAGTTCACGGCCAATCTGTTCAACATCTAT
CGCAAGGTGCTGGCGCACGGATTCACCCAGAAAACATCGCTGGGGATGCT
GCGCAGCGATCTGATGCTGGAGTCCGGCTGTCCCGAGCTGTCGCCACGGG
CGCTGCGAACGGCGGCCGGTGAGGATCGTGGTCAGGATGCGGGCGCTGCT
GTGGGGCAAATAGCTGGAGCTAACGGAGCTGCAGGAGTCGGAACTGCCGC
TGGCACGGGCAGCAAGGAGGAGGAGCACAGGGAGGTCCAGCTAAGCCGGG
TCACCAAAGAGCCGGAACGGAGGGCGACCGGCGCCCAGTCCGCTTACTGC
TGCTGGAAGCAAGTCGAGATCAATACGATAGCATCGGGCTTTGGCCACTT
GGGACCAGCAAGTAAAACCATACAAAGATTGTTGCCTAGAGTTTTCATTT
GCGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGT
CATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATC
CTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGC
AACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGA
TCTATCACAGGAGTCCAGCGAGCTCGATATCAAATTACGCCCGCCCTGCC
ACTCATCGCAGTACTGTTTGTAATTCATTAAAGCATTCTGCGACTGGAGC
ATCACAACGGCATGATGACTGATCGCAGCGGCATCAGCACCTTGTTCGCT
TGGCGTTATATATTTGCCAATGGGAACGGGGCCAAGAATTGCATATTGGC
CAGTTAATTC
UFO11075.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:08:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GS-RG | 1337 | CG6835-RG | 165..909 | 8..752 | 3725 | 100 | Plus |
| CG32495-RE | 1337 | CG32495-RE | 165..909 | 8..752 | 3725 | 100 | Plus |
| GS-RI | 2151 | CG6835-RI | 314..1036 | 8..730 | 3615 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 21:08:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 17891586..17891934 | 379..727 | 1745 | 100 | Plus |
| X | 23542271 | X | 17901741..17902089 | 379..727 | 1745 | 100 | Plus |
| X | 23542271 | X | 17890461..17890673 | 168..380 | 1065 | 100 | Plus |
| X | 23542271 | X | 17900616..17900828 | 168..380 | 1065 | 100 | Plus |
| X | 23542271 | X | 17900145..17900304 | 8..167 | 800 | 100 | Plus |
| X | 23542271 | X | 17889990..17890149 | 8..167 | 800 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 21:08:19 has no hits.
UFO11075.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-02-08 10:11:19 Download gff for
UFO11075.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GS-RG | 156..919 | 1..763 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:13:07 Download gff for
UFO11075.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GS-RG | 156..919 | 1..763 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:39:57 Download gff for
UFO11075.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32495-RE | 156..919 | 1..763 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:39:57 Download gff for
UFO11075.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 17891588..17891934 | 381..727 | 100 | -> | Plus |
| X | 17889981..17890149 | 1..167 | 98 | -> | Plus |
| X | 17890461..17890673 | 168..380 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:13:07 Download gff for
UFO11075.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 17784014..17784182 | 1..167 | 98 | -> | Plus |
| arm_X | 17784494..17784706 | 168..380 | 100 | -> | Plus |
| arm_X | 17785621..17785967 | 381..727 | 100 | -> | Plus |
