UFO11079.5prime Sequence
1017 bp (1006 high quality bases) assembled on 2012-02-08
> UFO11079.5prime
CAGTCGACATGAGAGTTCCGCCATGTGGATTCCATTTGTGTGTCATTTTG
GCCATAGTCGCGGAGATTAGAGGATTTTCGATGGAGGACAAGTGCAAATT
GTGGGCTGGAACTGGCTATATTGGTGATCCCAGTGATTGCCAGGCCTGGG
GATATTGCCAGGACAACAAACTCATCGATAGACGTAGCTGCACTGAAGGA
TTACTATACAGTTTCCGAGATGGCACCTGCAAGAGGGCATCCGATACGAT
TTGTCATTCCCAGCTCTCGGAGATTTGCGCCAGCCTCGAGCCTTGGAATT
ACGTGGCCAACCCAGCTGATTGTCGGAGATTCGTCAAGTGCGCGGATTTG
GATGATCCCACTTGGGGCGACTGTGGTGTGGGTCAGGTGTTTAGCAACAA
GAAGCAGACCTGCCTCGAGGAGGTTGCCGGCTGTCCACAGGATAATATCT
GCTCCCATATGAAAGATGGCTCCTTTGTGGGCGATCCCAAGAGCTGTCAA
ATCTACTATAAATGCCATAATGGATTTGGCACCATGTTGAATTGCTCCGT
TGGGCGATACTTTAATCGCAAAACGGGTAATTGCCAATCCTGGATGCCGC
ATTACTGTTCCAAGGATGATGAGGATAACATATTAACGCCACCATCCACG
GACCATAATATCTGCTCCAAGTATTATCAACGGGATAGAGATGGAGTGCA
ACTCCTGCCGGATCTGATGACCTGTTACGGATATTACTCCTGCACATCCC
AGTTCGACGTGGGCAAGTGGAGCAGCTGTCCTTGGGGACTGCACTTTGAG
TGGTGGAGCCAGCGGTGTGGCTCGCCGAAAGACAATAGCTGCTCCTACGA
TCGCTGCGCCAATAGAACCCAACTAATGGTGCCACCATTAACACGGGCCT
GCAGGAAGTTCACGATCTGTCAGATAATCGTTCGAAGAGCTCGCAAGTGT
CCGGAGGACTATCATATTTCATGAGCTATTGCGACAGTGCCACCGATGAA
TATCCCAATCCATAGGT
UFO11079.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:08:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5897-RB | 1671 | CG5897-RB | 14..1024 | 9..1016 | 4810 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 21:08:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11887911..11888911 | 1010..14 | 4605 | 98.9 | Minus |
Blast to na_te.dros performed 2014-11-27 21:08:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 2911..2989 | 920..998 | 124 | 65 | Plus |
UFO11079.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-02-08 10:11:22 Download gff for
UFO11079.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5897-RB | 14..1024 | 9..1017 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:13:16 Download gff for
UFO11079.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5897-RB | 14..1024 | 9..1017 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:40:04 Download gff for
UFO11079.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5897-RB | 14..1024 | 9..1017 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:40:04 Download gff for
UFO11079.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11887904..11888917 | 8..1017 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:13:16 Download gff for
UFO11079.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11881004..11882017 | 8..1017 | 98 | | Minus |
