UFO11091.5prime Sequence
1103 bp (1019 high quality bases) assembled on 2012-02-08
> UFO11091.5prime
CAGTCGACATGCAGCAATCTTTGCGCGTGGAACTGCTATTGATCGTTTAC
GGGTTGATTCTCGTTGTCTGGGGAATCAATGGATTAAACATACCCGAGTG
CAGTGGCCAGAATGGATTTATTAACAATACGCGATCCAATTGCAATTACT
CCCTCATCAATTGCTCTGGCCAGAACTCGATGTTCTGCACGGACAACACG
ACCTGCAATGCCAACTTCACCTGTAGCGACATACTTCCGGTGGATAATTC
AACAGCACTACCCATAAGCACAACTCCCAATGTGGTAACCACAGCCTCGA
CAACTGTTTCACCTTCCGATATTCGACGAGAGTGTCGTCAGGGTGTTACC
AAAAGATTTAGCTATCCGCAGAATTGTAACTACTTCTACTATTGCGTTGA
TGGCTTTCTGCTGGTGGAGCAATGTCCTATTGGCTACGCATTCGATCCCC
AAACTGGAGCTTGTGGTGGACGTACGGCAAGCTTTCTAGACCATTCGTTT
GGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCA
TAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCT
CACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGA
TGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCT
CGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAAT
TCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAAC
CTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGC
CCATGGTGAAAACGGGGGCGAAGAGTTGTCCATATTGGCCACGTTTAAAT
CAAAACTGGTGAAACTCACCCAGGGATTGCTGAGACGAAAAACATATCTC
AATAAACCCTTTAGGAATAGCCAGGTTCACGTAACACGCCACATCTTGCG
AATATATGTGTAGAACTGCGAAATCGTCTGTATCACTCAAGACGATGAAA
CGTTCAGTTTGCTCAATGAACGGGTACCAGTGAACATATCATTCCAGTCA
CGC
UFO11091.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:08:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42728-RA | 577 | CG42728-RA | 16..483 | 9..476 | 2340 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 21:08:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15527714..15528181 | 476..9 | 2340 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 21:08:56 has no hits.
UFO11091.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-02-08 10:11:27 Download gff for
UFO11091.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42728-RA | 8..486 | 1..480 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:13:31 Download gff for
UFO11091.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42728-RA | 8..486 | 1..480 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:40:16 Download gff for
UFO11091.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42728-RA | 8..486 | 1..480 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:40:16 Download gff for
UFO11091.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15527714..15528186 | 1..476 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:13:31 Download gff for
UFO11091.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15520814..15521286 | 1..476 | 99 | | Minus |
