UFO11096.5prime Sequence
1041 bp (976 high quality bases) assembled on 2012-02-08
> UFO11096.5prime
CAGTCGACATGCGTCGCACTTGGGTCCTGTTTTACTTATTCCTAATTGGG
TTGGCATTGGTAAAGACCACACCGAAAGAACTTCACTCAGAATCGATTTT
TGAAGATGACGTCGCTCTAAGGTCCAAGTCAAGTAAAGCTGATGCTCTGC
TTACAAAAACTACAACAAAAGCGTCAGCATCAAATTTATTCTTTAAAGTC
ATTACAACAACCCGACCACCTGTGACAATCAGGCGCGTTGTAGCCAAGTC
AAAGGGTAAGGATCCAGAAAGAACTGACCTCCACCGCAAGCACCTCACAC
ATCACAAACATCACTCAAAAAACAAAAAAAAGAATCCACATAATCGTGCC
GAAGCGAATCGAAACAAGGATCATAGTCCCCATGATCCCCACAAAAACCT
GAAAAGAAAGGCAGAGGCACTCCCTAAGTCAAATCAGAATATAAATGGCA
CTACTTCTCTGGAAGCCAAGAGTACGTCTTTAAAAGATGTACATAAGGCA
AGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAA
TCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGT
CATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCG
AGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTAT
CAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCAC
TCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCC
ATCACAAACGGCATGATGAACCCTGAATCGCCAGCGGCATCAGCACCTTG
TCGCCTTGCGTATATATTTGCCCATGATGAAAACGGGGGCGAAGAAGTTG
TCCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATG
GCTGAGACGAAACATATCCTCATAACCCTTAGGAATAGCAGTTTCACGTA
CACCGCCACATCTTTGCGAATATATGTGTAGAAACTGCCGG
UFO11096.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:09:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32457-RB | 621 | CG32457-RB | 28..516 | 9..497 | 2445 | 100 | Plus |
| CG32457-RC | 555 | CG32457-RC | 152..450 | 199..497 | 1495 | 100 | Plus |
| CG32457-RC | 555 | CG32457-RC | 28..151 | 9..132 | 620 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 21:09:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 22987669..22988157 | 9..497 | 2445 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 21:09:06 has no hits.
UFO11096.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-02-08 10:11:29 Download gff for
UFO11096.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32457-RB | 25..520 | 3..501 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:13:38 Download gff for
UFO11096.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32457-RB | 25..520 | 3..501 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:40:21 Download gff for
UFO11096.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32457-RB | 25..520 | 3..501 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:40:21 Download gff for
UFO11096.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 22987666..22988157 | 3..497 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:13:38 Download gff for
UFO11096.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 22980766..22981257 | 3..497 | 99 | == | Plus |
