UFO11135.5prime Sequence
1118 bp (1009 high quality bases) assembled on 2012-03-05
> UFO11135.5prime
CAGTCGACATGAGGTCTTCAGTACCGGTTTGTCTAATCCTGCTCGCTCTG
GCGTTGGGATCGGCGTGGGCTAATGATAATCCCTGCCAGGATGTGCGCAT
TCCCGGCTTCGTTTGCATGAACTGCACCACCTTGGGCTACTGCATCCGCG
ATGCCACCGGCAGCTGGGAAACGATTTCGATGCTGGGCTGCCAATCGGAG
TACAATTTCTATTGCAGCGACGAGGGTACCTTCGGATGCACCTTCCAGTC
GCAGTGCCAGGTGCCCAAGAGAGGTCCCTTCAGCTGTCAGCAGGCGGGCC
TGTTCCCGGATCCGTACGACTGTAGGCGGTACCACGAGTGCAGCGATCAG
AGTGTGGACACCCCTCGCATCTGCTCCAACGGAGCGGGCTACTCCACACT
CACGGGCACTTGTGTTCTGCCACGGGAGAGTGAGCAGTGCATCCAGGAGC
AGTTCACCTGCAGTCGGTCGGGACAAGTGGGTGGATGGGCGCCCGACAAT
CGGTACTTCTACGTCTGCGTCAATGACACGGCCAATTCGCTGTATCCGCT
GATGATGAAGTGCCACGAGGGATTCGTTTTCAACAGCTACAGCTGTGTGC
CCGACACCAGGAGCATGAGGAGCATTCAGGCGATGGAGTCCCACACGTGC
ATGAACAACGATAGGTACCAATGCCCCTTCCGAACCTCTGAGATCGAGTA
CTGCAAGTGCGTCGATGGAGAACTGGAGGTGATGACCTGTCCCGCCGGCT
TCCAAATTGATCCTAAGATCCTGACCTGCGTGACTGATAGGATCTATCAG
TGCTCGGACTTTGAGATCCTCAGCTGTCCCAATGTCTCCACCAAGGATGA
GTACTGCATATGCATCGATCACCAGCTGCAGATCTACAGCTGTCCAATGG
ACAGTATTTCAATGCTGAGACTCGAAGTGCCAATCAGAGTCAGAGGCAGC
TTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGTAGTGTCATAATCATAT
CATAATCATATTCATATCCACTAGCTAGAGATCTGTCATGACTAGTGCTG
ATTCTCACAATAAAAAACGCCGCGCACGAGCGTTCTGAACAAACTCGATG
ATTCGGAGGTCCTACTGG
UFO11135.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:10:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32302-RA | 1079 | CG32302-RA | 16..954 | 9..945 | 4645 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 21:10:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 2268840..2269778 | 9..945 | 4595 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-27 21:10:26 has no hits.
UFO11135.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 10:38:48 Download gff for
UFO11135.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32302-RA | 7..952 | 1..945 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:14:20 Download gff for
UFO11135.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32302-RA | 9..954 | 1..945 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:40:56 Download gff for
UFO11135.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32302-RA | 9..954 | 1..945 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:40:56 Download gff for
UFO11135.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 2268833..2269778 | 1..945 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:14:20 Download gff for
UFO11135.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 2268833..2269778 | 1..945 | 99 | == | Plus |
