UFO11137.5prime Sequence
1137 bp (1024 high quality bases) assembled on 2012-03-05
> UFO11137.5prime
CAGTCGACATGGAACGCTGGCAGAATCGCGTGGCCGTCGTCACTGGCGCC
AGTTCGGGCATCGGATCGGCCATAGCCAAGGATCTGGTCCTAGCCGGAAT
GACGGTGGTGGGTCTGGCCCGACGTGTCGATCGCGTCAAGGAGCTGCAGA
GGGAGCTGCCGGCGGAGAAGCGCGGCAAACTTTTTGCCCTCTACTGCGAC
GTGGGCAACGAGAGTTCCGTAAACGAGGCCTTCGATTGGATCATCCAAAA
GTTGGGCGCCATCGATGTGCTGGTCAACAATGCCGGCACCCTGCAACCCG
GCTATCTGGTGGACATGAATCCGGCCGTAATGCAGCAGGTATTGCAGACG
AACATCATGGGCATCGTGCTGTGCACCCAGCGAGCGGTGCGTTCCATGCG
GGAGCGCAAGTTCGACGGCCATGTGGTGCTCATCAATAGCATCCTGGGGC
ACAAGACCATGACGGCCACGGAGGGCGTGGCGCCCGATGTGAACGTCTAT
CCGCCCAGCAAGCATGCAGTTACAGCGCTGGCCGAAGGATATCGCCAGGA
GTTCTTCGGCCTGGGCACCCGCATCAAGATTACGAGCGTCAGTCCGGGCG
TGGTGGACACGGAGATCGTGCCGGACAGCATTAGGGAGGCCATCAAGGAT
CGAATGCTCCACTCCGAGGACATCGCACAGGGAGTGCTGTACGCCATCGC
CACACCGCCACATGTCCAGGTGCACGAGCTGATCATCAAGCCACTTGGCG
AGACCATGGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTA
AGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAG
GAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCC
GGCGCAACCGAGCGTTCTGACAAATCCAGATGGAGTTCTGAGTCATTACT
GGATCTTTTCAACAGGAGTCCAGCGAGCTCGATATTCAAATTACGCCCCG
CCCTGCCACTCATCGCAGTACTGTTTGTATTCATTAGCATTCTGGCGACT
GAGCAATCACAAACGCATGATGAACATGAATCGCAGCGCATTCAGACCTT
GTGCCTTGCTATAAATTGCATTGTGAAACGAGGCTAG
UFO11137.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:10:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| antdh-RA | 950 | CG1386-RA | 29..779 | 8..758 | 3755 | 100 | Plus |
| CG10962-RB | 1074 | CG10962-RB | 29..167 | 9..147 | 200 | 77.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 21:10:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11168454..11169030 | 584..8 | 2885 | 100 | Minus |
| X | 23542271 | X | 11168201..11168375 | 758..584 | 875 | 100 | Minus |
| X | 23542271 | X | 8974089..8974227 | 147..9 | 200 | 76.3 | Minus |
Blast to na_te.dros performed on 2014-11-27 21:10:54 has no hits.
UFO11137.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 10:38:55 Download gff for
UFO11137.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| antdh-RA | 29..784 | 8..764 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:14:35 Download gff for
UFO11137.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| antdh-RA | 29..784 | 8..764 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:41:11 Download gff for
UFO11137.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| antdh-RA | 29..784 | 8..764 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:41:11 Download gff for
UFO11137.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11168196..11168374 | 585..764 | 98 | <- | Minus |
| X | 11168454..11169030 | 8..584 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:14:35 Download gff for
UFO11137.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11062229..11062407 | 585..764 | 98 | <- | Minus |
| arm_X | 11062487..11063063 | 8..584 | 100 | | Minus |
