UFO11143.5prime Sequence
1151 bp (1049 high quality bases) assembled on 2012-03-05
> UFO11143.5prime
CAGTCGACATGTCTGCACATTACTGCGGCTACAACCCGCCGCCGCCGAAC
TTCAAAACCTTTTTTCCCGAAAAATACAAGGACCGACTGCAGCGACTTCC
CAATTTTGGAAAATTGCGATCATCGTGGGAGATCCACAGGCGACCGACCC
TCGTGGTTCTTCATGTGTTTGCGGATGATATCGGTGCGCTAGACAAATGG
ATAGATGTGGTATACCGACTAGCTGCCCCTGGGTTTCTTGGCGGCGAGAT
GGACTTTTTCGTGGACGATCTGTGGCAGTCGTTCATCTTCAATGAGGATG
ACTTCAGCTTCTCTCGGAGTGACGAAGGATGTACAGTGGACTCATTTCCC
CTGATATACGCCGCAAATTCAACTGGAAAGGTATTCTTCTTTGGGGATTT
CACTGGGCCTAAACTGCCCGACCTGGAGAGTCTAAGGGATTTCTGCGATC
AGGTGATTAAGGGGATAGCCGAGGAGCCCACTGCTAGAGATCCCAAGGTT
GAGAATATAAGCCTTGATAGCTGGAACGAACTTATGTACGCCAGTGATAA
TGATATAGCGATTTGCTTCTACAACTCCTTGCAAAATGGCGCTGAAGTCA
ATAGTAGTCTTATGGCAAATCTGGATTGGCTGGCCGATAAACTGAAACAG
GAGTCAGTGCTTCTGTACAAGATGGATATACATGGATCTAGAATCCCAAA
AAGTTCCTCGGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGG
TAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCT
AGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGC
CCGGCGGCAACCGAGCGTTCTGAACAATCCAGATGGAGTTCTGAGGTCAT
TACTGGATCTATCAACAGAGTCCAAGCGAGCTCGATATCAAATTACGCCC
GCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAGCATTCTGCGACAT
GCAGCCATCACAAACGCATGATGACCTGATCGCAGCGCATCAGCACCTTG
TCGCCTTGGCGTTTAATATTTGCCCATGTGAAACGGGGGCGAGAGTTGTC
ATATTGCCACGTTTAAACAACTGTGTAACTCACCAGAATGCTGAAACGAA
A
UFO11143.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:11:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14907-RA | 1103 | CG14907-RA | 59..762 | 7..710 | 3520 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 21:11:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 16651558..16652261 | 710..7 | 3520 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 21:11:08 has no hits.
UFO11143.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 10:38:58 Download gff for
UFO11143.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14906-RB | 40..750 | 1..710 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:14:43 Download gff for
UFO11143.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14907-RA | 52..762 | 1..710 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:41:19 Download gff for
UFO11143.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14907-RA | 52..762 | 1..710 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:41:19 Download gff for
UFO11143.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 16651558..16652265 | 1..710 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:14:43 Download gff for
UFO11143.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 12477280..12477987 | 1..710 | 99 | | Minus |
