UFO11148.5prime Sequence
1107 bp (1071 high quality bases) assembled on 2012-03-05
> UFO11148.5prime
CAGTCGACATGATACTGCTGTATGAGCTGCAAAGGCGAATGGGCAACCTG
AGACCCACCGCCACGGTTGTGACCACCCCCACCGGTGTACGCTACATTGA
GCGAAGCACTTCATCCGTCTGCGTGGAGGACATTGCGCACTGCTCCCAGC
AACTGGATCCGCGTGAATACGGCTTTGTCGTGGATACCAAGCCGGACTCT
GTGCCCGCCTGCATTCTGAGCGACTTTCTCTACCTGGGCTCGCAGGATGC
AGTTAGCGCGGATAACATCATAAAATATAAGATAACTCACATCCTGAGTG
TCGGCATACAGACGCCCGAGGTGGAGTGGCCCTTACCCGTAAATTGTACA
TTTTTGCCCTGCCTGGATCTGCCGGAAACCAACCTGATGAACTACATCTT
GCCCGCGTCAATGGAGTTTATTGAAGATGCGCACAGATCGCAGGGTTGCG
TGCTCGTCCACTGCAACGCAGGCGTTTCGCGATCCCCCTCTGTGGTAATC
GGTTATTTAATGCAGCGCCGTGACATGTGCTACGAAGATGCATACAATCT
GGTAAAATCATGGAGACCGTGTATTCAGCCCAATGCGGGATTCATACAAC
AGTTAAAGAGGTCTGATGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGG
GCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAA
CTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAA
AAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCT
GAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAA
ATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGC
ATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGC
CAGCGCATCAGCACCTTGTCGCTTGCGTATATATTTGCCCATGTGAAAAC
GGGGGCGAAGAAGTTGTCCATATTGCCACGTTAATCAAACTGGTGAAACT
CACCAGGATGCTGAAACGAAAAACATATTCCTCATAACCTTTAGGAAATT
AGGCCAG
UFO11148.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:10:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mkp-RC | 1900 | CG34099-RC | 1157..1765 | 9..617 | 3045 | 100 | Plus |
| Mkp-RD | 1603 | CG34099-RD | 860..1468 | 9..617 | 3045 | 100 | Plus |
| Mkp-RB | 1732 | CG34099-RB | 989..1597 | 9..617 | 3045 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 21:10:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 182657..183265 | 617..9 | 3045 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 21:10:51 has no hits.
UFO11148.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 10:38:54 Download gff for
UFO11148.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34140-RA | 983..1604 | 5..626 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:14:34 Download gff for
UFO11148.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34140-RA | 983..1604 | 5..626 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:41:10 Download gff for
UFO11148.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mkp-RB | 985..1606 | 5..626 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:41:10 Download gff for
UFO11148.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 182648..183269 | 5..626 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:14:34 Download gff for
UFO11148.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 182648..183269 | 5..626 | 99 | | Minus |
