UFO11161.5prime Sequence
1101 bp (1010 high quality bases) assembled on 2012-03-05
> UFO11161.5prime
CAGTCGACATGTCGTCGCAACTGCCAGCGGGAAGTGGACGTCGAGAGTGG
CAAGTGTGTGGGGCAAACTCCGGCCAGCGGCCAATGGCGGTTGGCCGAGG
CCACGCCCCGTGGCTCAATTACCGACCAGTGCTGCCCATCGGCGGGCAGA
GCGAAACCTGTTTCCACGAGCGAGAGGCAGTCAGGCGCATGTGCGATCAG
AGCGGGATGGATGGCTCAAGGGTGGACCAACCAGAAGAGGCAGGTTGCTG
GTATTATGGTAGGTTAGGTTCAAACAAGGTGGCAAACTGGCTCTTAACCG
AAATAGGAAGGAAGTCGGCAGCGGCGTCGACGTCGGGCAACTGGTTTGAC
TTGTTTCCGGCTCACTCCAACAGCCCAAACCCACCAGCAATCGGCAGAGG
CAGCCAAGTCGGCAGAGGGCAGGCAGAGCAGCGGCCGTCGGCACAATTTG
ATTGCATTTATGAAAAGCGTTTTCGCCCGCTAGCACGCGTCCGCTCCCAG
CTCGCAATTCGCCATCCGGCAAGCTTTCTAGACCATTCGTTTGGCGCGCG
GGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACA
ACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATA
AAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTC
TGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCA
AATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAG
CATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCG
CCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTG
AAAACGGGGGCGAAGAGTTGTCCATATTGGCCACGTTTAATCAAAACTGT
GAAACTCACCCAGGGATTGCTGAGACGAAAAAACAAATTTCTCAATAAAC
CCTTTAGAAATAGCAGCTTTTCACGTTACACGCCCACATCTGCCAATATA
TGTGTAGAACTGCCGAAATCGTCTGCTATTCACTCAGAGCCGATTGAAAC
G
UFO11161.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:11:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| C15-RA | 1856 | CG7937-RA | 1..37 | 482..518 | 185 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 21:11:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 21499513..21500022 | 9..518 | 2550 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 21:11:38 has no hits.
UFO11161.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:15:00 Download gff for
UFO11161.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| C15-RA | 1..40 | 482..522 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:41:31 Download gff for
UFO11161.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| C15-RA | 1..40 | 482..522 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:41:31 Download gff for
UFO11161.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 21499505..21500028 | 1..523 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:15:00 Download gff for
UFO11161.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 17325227..17325750 | 1..523 | 98 | -> | Plus |
