UFO11179.5prime Sequence
1147 bp (1052 high quality bases) assembled on 2012-03-05
> UFO11179.5prime
CAGTCGACATGGGACTCTCGAAGATCTGGCTTCTGGTGAGTTGTCTGCTG
TGGACCTGCCTGCCCCAGAGCCAGGGAACGGTGTATCCGAGGGACATCCT
TCTAAAGACTCCGAAATTTCGACGCGTCTGGGGCGGGGTGCAGTCCAACA
CAGGCCCGAATTTCGGAGGCTGGCTGTTGCGGATCCTGAACGGTGACGGT
AACTTTGCCTGCGGAGCTGCCTACTATGCCCCTCTGCTCGTGATCACCTC
GGCCAACTGCATCTATCCGTATCGGAACAGCCTTGAAGGTGCCACGGTGG
AGGGCACCGCGTTCTCCGAATGCGATAGGGAGAACTATGCTGATATCGAT
ACGATTCAATTTCCCGAGAAATTTATCTACCAGAAACTCTACATGGACGT
GGCAGTAGTGCGTCTAAGGGATCCCGTTAGGGGACGGCTCACTGAGTTCA
TCCGTCTTTGCAGCGTCAAAGTGCAGCCCAAAATGCAGATGGTGGTCTTC
GGATGGGGTTTCGACAATACGGAGGTGGAGATACCCTCATCGGATCCCCG
AAACGTTACAGTAACTATTATATCCATTAAGGAGTGCCGTCAAAAATTCA
AAAGCCCAAAGATAGCGAGCACATCGATCTGCGCCAGGCAGCCCAAGAAT
CCGAAGCAGTGCCTCTACGACGGAGGAAGCCCCCTGATTTACGGAAGAGA
GCTCTGCGGCGTCGTGTCCTTCGGGTCACACTGCATCGACACCTCTAGGC
CCGGCATGTACACCAACATCAGAAGAGTAAAACGATTCATTACTGAAACG
GAAGAATCCATAAATGCCGGTGATGTCTTCAGATCAACTAAAGTAGTGAA
AGAAACAAAGAAACCCCCAAAGAAAACATCAAACCAAAATCGAAACCAGT
AAAGATACAACGTCTTTAAGACTGTAATGGTGGAGCCCTTGGTGTGTGCA
AGCTTTCTAGACCATTCGTTTGCGCGCGGGCCCAGGTAGTGTCATAATCA
TATCATAATCATAATCATATCCACACTAGCCTAGGAAATCCTGGTCATGA
CTAGGTGCTTGATCCCACCAATAAAAACCCCGGCGCACCGAGCGTCTGAA
CAAATCGAATGGGAGGTCTGAGTCCATACTGAATCTATCACGGAATT
UFO11179.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:12:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34129-RA | 972 | CG34129-RA | 6..947 | 9..947 | 4635 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 21:12:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 26190259..26191200 | 947..9 | 4565 | 99.5 | Minus |
Blast to na_te.dros performed on 2014-11-27 21:12:07 has no hits.
UFO11179.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 10:39:11 Download gff for
UFO11179.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34129-RA | 1..947 | 7..950 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:15:17 Download gff for
UFO11179.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34129-RA | 1..951 | 7..951 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:41:44 Download gff for
UFO11179.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34129-RA | 1..951 | 7..951 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:41:44 Download gff for
UFO11179.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 26190259..26191207 | 1..947 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:15:17 Download gff for
UFO11179.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 22015981..22016929 | 1..947 | 99 | | Minus |
