UFO11191.5prime Sequence
1149 bp (1014 high quality bases) assembled on 2012-03-05
> UFO11191.5prime
CAGTCGACATGAAGGTCTTTGTGTGCTTGTTGGCTTCCCTGGCTCTGGCC
AACGCCGGTGGCCTCCGAGGCGGTGCAGGAGGCGGCTATCTGCCCGGCGG
AGGACGTGGTGGTGGCGGCGGAGGATTCGGTGGCCGCCCGGCTATTGGAG
CTGGCCTGGTGTCCCACGTCTCGCAGTCGCAGGGCAACACTAAGGTCCAC
ATTGGTGGTGGTTCCGCCGGCGGTGCTGGTGCTTATGGCGGCGGTGCTGC
CTCGTACGGCGGTGGAGCTGGTGCTGCCTATGGAGGTGGTGCTGGAGCTT
CCTACGGCGGTGGTGCAGCCTCTTATGGCGGTGGACGCGGATCTGGTGGA
TGGCAAGGAGCTGGAGCTGGAGCTGGTCGTGGTGGTGCTGGAGGAGCTGG
TGGCTGGCAAGGTGCTGGAGCAGGTCGTGGTGGAGCAGGAGGCTGGCAGG
GTGGTGCCGGAGGTGCTGGAGCTGGCAACGCCTGGGGTAACCCCGCTGAG
TTCGATTACACTGTCAACCACGCTTCCGGAGGTGCTGGTGGTGCAGGTGG
GGCCTACGGTGGTGCTGCTGGTGGTGGCTCCCGCGGCGGTGCCGGCTGGT
GGAACGATGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTA
AGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAG
GAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCC
GGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATT
ACTGGATCTATCAACAGGAGTCAAGCGAGCTCGATATCAAATTACGCCCC
GCCCTGCCACTCATCGCAGTACTGTGTATTCATTAAGCATTCTGCCGACA
TGGAAGCCATCACAAACGGCATGATGAACTGAATCGCCAGGCGCATCAGC
ATCTTGTCGCCTTGCGTATTAATATTTGCCCATGTTGAAAACGGGGGCGA
AGAAGTTGTCATATTGTCACGTTTAATTCAAACTGGTGAAACTCACCCAG
GGATGCCTTGAAACGAATAACATATTCTCAATAAACCCTTAGGAAATAGC
AGTTTCACCGTTACACGCCATCTTGCAATTATTGTTAGACTGCGGAAAT
UFO11191.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:12:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10597-RB | 708 | CG10597-RB | 47..646 | 9..608 | 3000 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 21:12:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 17230337..17230933 | 608..12 | 2985 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 21:12:26 has no hits.
UFO11191.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 10:39:14 Download gff for
UFO11191.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10597-RB | 1..603 | 9..612 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:15:29 Download gff for
UFO11191.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10597-RB | 43..650 | 1..613 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:41:54 Download gff for
UFO11191.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10597-RB | 43..650 | 1..613 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:41:54 Download gff for
UFO11191.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 17230333..17230939 | 4..613 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:15:29 Download gff for
UFO11191.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 17124366..17124972 | 4..613 | 99 | | Minus |
