UFO11196.5prime Sequence
1073 bp (1014 high quality bases) assembled on 2012-03-05
> UFO11196.5prime
CAGTCGACATGGGAGATCGCAACAAGCAGCCGGTTATTCTGCTGAAGGTT
CCGTCCTCCGATGATTTCTATGGTTCGGCGTTGCGCAGCCATAACCTGGA
TCCCATCTTCATTACTCCCTCGCATTTTGTGTTCAAGAATCTGAAGCAAT
TGCAAGCCAAGTTGCATGAGCCGCACAAATATGCCGGGATTATATTTGCA
TCCCCGCGCTGTGTCCAAGCTGTAAACGAGGCACTAGGAAAGACACCACT
TCCTAGTTGCTGGCGTGCGTTACACAATTATTCCCTAGGCAAGAACACGC
ACAGCGCCGCCTGGATAACATTCCAGAATCTTCCGACTCTGGGCGATCAT
GCCGTGAATGCAAACAATCTGTGCGATCTGATCGTGGAGACGTTTGGACC
CAAGAGGGATCTGCCACTGCTCATGCCCTGCGGCAATGGCGTGGGTCAGA
CACTGCGCCTCCGTTTGGTCGCCCAGGGATTCCGGGTGGATGCCTGCGAA
GTGTACGAGAGTCGGTCGCATCCGGATTTCGTCAATCAGATGCGGCACGC
CCTCAAATTCAAGCGAATGGAAACGATTGTGTTCTTCGGACCCTCCAGTG
TCCGCAGCTCCTTGGAGTTCTTTGGGAACTACAACGTTTCGCTTAAGGAT
CGCAAGCTGATAGCCGTGGGCAGTGGCACCAGGAAGGCAATGGAGGAATC
TGGAATTAAGGCGGACGGAGTCGTGAATGCTGCTGACGTCGACCGCCTGA
TAAATATCATCAAACAGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGG
CCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACACT
AGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAA
AACGCCCGGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTG
AGTCATTACTGGATCTATCACAGGAGTCAGCGAGCTCGATTTCAATTACG
CCCCCCGCCCTGCCACTCATCGCAGTACTGTTTGTAATTCATTTAAGCAT
TCTGCCCGACCATGCAAGCCCAT
UFO11196.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:09:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9589-RA | 974 | CG9589-RA | 83..839 | 8..764 | 3785 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 21:09:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 15788603..15789359 | 8..764 | 3785 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 21:09:13 has no hits.
UFO11196.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 10:38:33 Download gff for
UFO11196.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9589-RA | 83..848 | 8..775 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:13:42 Download gff for
UFO11196.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9589-RA | 83..848 | 8..775 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:40:25 Download gff for
UFO11196.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9589-RA | 83..848 | 8..775 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:40:25 Download gff for
UFO11196.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 15788603..15789368 | 8..775 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:13:42 Download gff for
UFO11196.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 11614325..11615090 | 8..775 | 99 | == | Plus |
