UFO11203.5prime Sequence
911 bp (910 high quality bases) assembled on 2012-04-16
> UFO11203.5prime
CAGTCGACATGCAGGAGTTAATAGTCGGCGGCATCGCCATCAGTGGCGTT
CCCTTCGCCAATGAGACGGTCGAGAAGGAAAGTCGCCAGAATCAGCTGAG
TGCATCCACGCTAGAGGATCACACGCCGTTTCCCGGTCTGTCCCGCATCA
CTCCATCGCTGATCCTTTGCGGTGCCGCGGCGGTGGTGCCCGCCTACATG
GACAAACTGGGCGTGAGCTGCGTCATCAACGTGGCGCCCGAGCTGCCGGA
CACACCACTGCCCAGCCAGAAGAACCCGCTCTATCTCCGCATCATGGCCC
AGGATCGCTCCGAGGTGGACTTGGCCAAGCATTTTGACGAGGCGGCCGAT
CTGATCGAGGAGGTGCATCTCTCCGGCGGCTGCACGTTGATCCACTGCGT
GGCCGGCGTCAGCCGCTCGGCCAGCCTGTGCCTGGCCTATCTAATGAAGC
ACGCCGGGATGAGCTTGCGCGAGGCCTACAAGCATGTGCAGGCCATACGT
CCGCAGGTTCGCCCGAACTCCGGATTCTTCCAGCAGCTGCGACGGTACGA
GCAACAGCTGCGGGGCAGCAGCTCGGTGGCCATGGTGTACTTCGCCTCGC
TGGACAAGGAGATCCCCGACATACTGGAGCCCGAGTACAGGGCCATGGAG
GACTTCTACCAGCGCTACCGCAGCTCCCTCAAGAGGCGAGCAAGCTTTCT
AGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATC
ATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTA
GTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTTC
TGAACAAATCCAGAATGAAGTTCTTGAGTCATTACTGGATCTATCAACAG
GAATTCAAGCG
UFO11203.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:30:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15528-RB | 1032 | CG15528-RB | 173..855 | 7..689 | 3415 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:30:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 30048812..30049409 | 689..92 | 2990 | 100 | Minus |
| 3R | 32079331 | 3R | 30051856..30051940 | 91..7 | 425 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:30:08 has no hits.
UFO11203.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-16 11:41:08 Download gff for
UFO11203.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15528-RB | 168..860 | 1..695 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:18:43 Download gff for
UFO11203.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15528-RB | 168..860 | 1..695 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:31:42 Download gff for
UFO11203.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15528-RB | 168..860 | 1..695 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:31:42 Download gff for
UFO11203.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 30048807..30049409 | 92..695 | 99 | <- | Minus |
| 3R | 30051856..30051945 | 1..91 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:18:43 Download gff for
UFO11203.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 25874529..25875131 | 92..695 | 99 | <- | Minus |
| arm_3R | 25877578..25877667 | 1..91 | 96 | | Minus |
