UFO11212.5prime Sequence
318 bp (307 high quality bases) assembled on 2012-04-16
> UFO11212.5prime
CAGTCGACATGGCGGCTCGCCTGGAAATCACCGTTAGCTTGGCGCTCGCT
GCAACGCTACTGTGCAGCATATTGGGTCATTGCGAAATGTCCGTTTACCC
AGGATTGCGCCGCCGACCCATTCAGCCGCCTGTGATGGATCCGCAGAGTG
AGCAAGAGTATGCTTTTCTGGCCCAGATGATGGAGCAGTATGCCCGCCGT
CGGCTGCAGCAGCAGTTCGACCAACAGCTGCACGAAATCAACCTGAAGAT
GGATCGTCAGCGGCAGCTCTTGGAGCAGGAGCGGTACCGCCAGCGGCAGC
AGGAGCTCCAGGTACAGC
UFO11212.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:29:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG44247-RB | 3629 | CG44247-RB | 514..823 | 9..318 | 1550 | 100 | Plus |
| CG44247-RA | 2696 | CG44247-RA | 514..823 | 9..318 | 1550 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:29:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24878136..24878354 | 100..318 | 1095 | 100 | Plus |
| 2R | 25286936 | 2R | 24877204..24877298 | 9..103 | 475 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:29:56 has no hits.
UFO11212.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-16 11:41:05 Download gff for
UFO11212.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Atf-2-RB | 487..806 | 1..318 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:18:37 Download gff for
UFO11212.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG44247-RA | 504..823 | 1..318 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:31:36 Download gff for
UFO11212.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG44247-RA | 504..823 | 1..318 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:31:36 Download gff for
UFO11212.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24877194..24877297 | 1..102 | 96 | -> | Plus |
| 2R | 24878139..24878354 | 103..318 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:18:37 Download gff for
UFO11212.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20764717..20764820 | 1..102 | 96 | -> | Plus |
| arm_2R | 20765662..20765877 | 103..318 | 100 | | Plus |
