UFO11214.5prime Sequence
1128 bp (1009 high quality bases) assembled on 2012-04-16
> UFO11214.5prime
CAGTCGACATGGGATCGATCGTGGCCACAGCAGCTATTCTTTTATTCTGC
GTCCTTTCGGGCGAAGCCTGTAGGTATTGTGTCCCTATGGAGAAGTGCTT
AATACTAAGTCGAAAACTAAATAGTTGCCCATTTAATCACGTCTGTTGTG
ACATTATCATAAAGAGTCCTTATATCCCTAGCGGACCGAATGAGGAATCC
GATTCTGAGTCTGCATCATCTTCTACAGAAGAGGAAAACATACCAACCTT
TATCTATTTTCCAACGAGACCAACAGTCTCAAGTGAGCCCCAAAACAATG
TTTCTACGGAACCTGATGTACCCATTACTTATTGGCCACTTAAAGGATCG
GGCGCCCCAACAAATGATGGTGCGCAAGCTGAGCAACCAAAGCCAACTGA
ACGGACACAGCCAGGAGGCAGGTGCAATACGACTGGTCTATATTCCTGGG
TGGTAGCCCTATTTTACGAAGAAGTTTACTTGACCGGCGGCTCACTAATT
AGTCCAAAAGTGATCCTAACGGCAGCCCACAACACAATGAACAAAATGAA
TGAAGATAGAATTGTGGTTAGGGCCGGCGAGTTTGTCATGAACACAACAA
ATGAACCCATTCAGTATGAGGAGCGCGTTGTTGAAAGGATTGTGAGACAT
GAAGGATTCATTTTTCAGTCGGGTATTAATAATGTGGCTCTTATTTTCGT
AAAAACACCGTTCGTGCTAAACGATCGCATTGGAGTATTGACGTTGCCAA
GCCGACAAGCGTCGTTCGAGGGACGTCGCTGTACGGTTGCCGGTTGGGAC
TTGGTGAGTTCCCATGATCAAAGCCGTATGAGAATATAAAGAAATTAGAG
TTAACCGTGTTGGACAGAACGACATGCGTGGCTCAGTTTAGAAATACACT
TTGGGCAGGATTTTGATCTCATCCGAGTCTGATTTGCGCCCGAAGTGAAA
TAAACCCGGGATTTCTGCTTTGGCGGTGGAGTTATGCATTGTCTGCTCCC
TCGGAAATGAAATCCACACGTCTCGAGCAGCTGGGATCGTCGCTGGGGCA
TGGGGTGTGAATGAACCTCCGGAATCTACCCATGTGCCATGTTCCGAGTG
AATTATAATGAGATGCACTTGCAAGCCT
UFO11214.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:30:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18563-RB | 1251 | CG18563-RB | 18..1102 | 7..1079 | 5045 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:30:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 17456842..17457694 | 1059..216 | 3705 | 98.6 | Minus |
| 2L | 23513712 | 2L | 17457870..17458027 | 164..7 | 790 | 100 | Minus |
| 2L | 23513712 | 2L | 17457756..17457808 | 215..163 | 265 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:30:29 has no hits.
UFO11214.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-16 11:41:11 Download gff for
UFO11214.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18563-RB | 1..1083 | 9..1079 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:18:55 Download gff for
UFO11214.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18563-RB | 11..1102 | 1..1079 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:31:52 Download gff for
UFO11214.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18563-RB | 11..1102 | 1..1079 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:31:52 Download gff for
UFO11214.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 17456797..17457694 | 216..1098 | 97 | <- | Minus |
| 2L | 17457756..17457806 | 165..215 | 100 | <- | Minus |
| 2L | 17457870..17458030 | 1..164 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:18:55 Download gff for
UFO11214.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 17456797..17457694 | 216..1098 | 97 | <- | Minus |
| arm_2L | 17457756..17457806 | 165..215 | 100 | <- | Minus |
| arm_2L | 17457870..17458030 | 1..164 | 97 | | Minus |
