UFO11222.5prime Sequence
315 bp (315 high quality bases) assembled on 2012-04-16
> UFO11222.5prime
CAGTCGACATGAAGAAGAGCTCCACGCTGACCACGACCACGTCGATGCCG
GCGAGTCCGACGCTCTCGGCACAGACGCTCTCCGCCAGCAAGATCAGCCT
GAACAGCAGCCGTTGCGGCTCGGCGGGATCGGGATGCGGATCCGCATCCG
GTTCGATGCGCTCCGCCTGCCAATCACCGGTGCGGCCGGGGAGCGGATGC
GTGGACGCCATCAAGGCCAAGCGCGAGGAGATCGAGATGGACACGCTGCT
CGAGAAGGCAAAGTTCTATACCTCCGTGTGCCTTGGTACGACTGCCATTT
TGTCGGTGTTCACAT
UFO11222.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:30:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Teh2-RB | 2679 | CG15004-RB | 1423..1730 | 8..315 | 1540 | 100 | Plus |
| Teh2-RA | 1527 | CG15004-RA | 35..342 | 8..315 | 1540 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:30:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4181522..4181802 | 288..8 | 1405 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:30:16 has no hits.
UFO11222.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-16 11:41:09 Download gff for
UFO11222.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Teh2-RB | 1417..1730 | 1..315 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:18:48 Download gff for
UFO11222.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Teh2-RA | 29..342 | 1..315 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:31:46 Download gff for
UFO11222.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Teh2-RA | 29..342 | 1..315 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:31:46 Download gff for
UFO11222.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4181421..4181450 | 286..315 | 100 | <- | Minus |
| 3L | 4181525..4181805 | 1..285 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:18:48 Download gff for
UFO11222.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4181421..4181450 | 286..315 | 100 | <- | Minus |
| arm_3L | 4181525..4181805 | 1..285 | 98 | | Minus |
