UFO11233.5prime Sequence
897 bp (896 high quality bases) assembled on 2012-04-16
> UFO11233.5prime
CAGTCGACATGATGAAACTGGTAGTGTCGCTACTCTCAATTTGCGCCTTG
ACGGCAGCTCGTCCTGGTTTCCTGCATGGCCACCACCATCACTATCCGGA
AATCCCTTACTATCCACACCACCATCATGTGGAACCACTGCACTACCATC
TGCCCGCCGCCGTCTCCCACCAGAGCTCCACGGTGGTGCACAGTGTGCCG
CACCACATAATCAAGCCGGTCCTGCTGCCCACTGTGGTGAAGACAGTGGT
GCATCCGCCCATCATCAAGGCTTATCATCCTGCGCCCATCATCAAGGCCT
ACCACCCCTACGATCCCTTCCATCTGCATCACCATCACGACTTCCACGAC
TACCATCTGCACGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCA
GGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGC
CTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAAC
GCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGT
CATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTAC
GCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCT
GCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCG
GCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACG
GGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAATCAAACTGGTGAAAC
TCACCCAGGGGTTGGCTGAGACGAAAAACATATTCTCATAAAACCCTTTT
AGGGAAATAGGCCTGGTTTTCACGTAACACGCCACATCTTGTCGAAT
UFO11233.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:31:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13062-RB | 801 | CG13062-RB | 243..596 | 9..362 | 1770 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:31:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16314602..16314944 | 20..362 | 1715 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:31:37 has no hits.
UFO11233.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-16 11:41:23 Download gff for
UFO11233.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13062-RB | 237..599 | 1..366 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:19:32 Download gff for
UFO11233.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13062-RB | 237..599 | 1..366 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:32:16 Download gff for
UFO11233.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13062-RB | 237..599 | 1..366 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:32:16 Download gff for
UFO11233.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16314602..16314944 | 20..362 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:19:32 Download gff for
UFO11233.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16307702..16308044 | 20..362 | 100 | == | Plus |
