Clone UFO11242 Report

Search the DGRC for UFO11242

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:112
Well:42
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG32085-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO11242.5prime Sequence

697 bp (696 high quality bases) assembled on 2012-04-16

> UFO11242.5prime
CAGTCGACATGTCATCGATCTCGGCGCAGGGCGTGGTCGAGCGAGCATCC
GCGGAGTTGTCGAAGCGGATCAATGGCCTGGGCCTGCGCTCGAAGCACCA
TCATAGCAGCACATCCAGTGGTGCTGGTGGCGCCGGCGATGCTGCATCCC
CGGCAGGAGCCACGCCCACTCCGGCAGCGCCCAGCGGCAAGACGTCGGTG
ATGGAGCGCGTAACGAACGCCCTGTGCGGCGGTGGCAACTCAAATTCTAA
CTCAGGATCGAATAGCTCCAATAGCAACACCTCTTCAGCGTCTGCCACCG
CTGCCACATCGCCCGCCAGCAACGCCAATCCTCCACAGACGCCGGACAAA
CCGTCGCGTGGCAGTAGCCCCAGTCCCGGCGGTATCACAATGCCAGGTGG
CCAGTCGCAGGTCCAGAACTCCACACACCACCTCCTGCAGCAGCAACAAC
AGCAACAGCAGCATATGCAGCTGCAACAATCGCAGCAGCAGCATCTCCAG
CTGCAAGCCTCCACGCTGATCAACTCCAACCACCATGTGATGGTGGGTCC
TGCTCCGCCCACTGGCATGCCTCTGGGTGCCCCGCCCACGCCGACAGTGA
AGTCCATTGCCAAGCAGATGAACATAACCATACCGGGTGGCGGAGAAAAT
CCCGGTTCGCCCACCTTCAACACCATGGGCATGGTGGCCGCCCTAAA

UFO11242.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:32:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG32085-RA 3030 CG32085-RA 577..1261 9..693 3395 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:32:12
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 11674798..11675482 693..9 3395 99.7 Minus
Blast to na_te.dros performed on 2014-11-28 02:32:14 has no hits.

UFO11242.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-16 11:41:29 Download gff for UFO11242.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32085-RA 564..1257 1..694 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:19:46 Download gff for UFO11242.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32085-RA 568..1261 1..694 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:32:28 Download gff for UFO11242.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32085-RA 568..1261 1..694 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:32:28 Download gff for UFO11242.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 11674797..11675486 1..694 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:19:46 Download gff for UFO11242.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 11667897..11668586 1..694 98   Minus