UFO11257.5prime Sequence
1087 bp (973 high quality bases) assembled on 2012-04-16
> UFO11257.5prime
CAGTCGACATGTCGCAGCATAACTATACGAACCCGGCCTTCTGCCAGAAC
AGCGAGTATTACCCGGTGCCCAGCGGCAACTCGTCGCGAGTGGAGTCCAT
CTACAACAGAAGCCTCCAGATGAACTTTGGAGCGGCTCCTCCGCGCGCCA
CTCGAGATCCCCGCGAGGGTCCACTGCGAATGCAGCGTAGCATGTCCACG
CGATCGGTGACGCGGAAACAACACCAGCAGCAGCAGCAGCAGCAACACCA
ACAGCAGATACACCAGCAACACCTGGCTCAGCAGCAGCAACACCAGCCGC
AATCCTCTAGTGGTCGCTATGCCTTGGTTCCCCTAGAGGAGCTGAACAGC
AGTAGGGCCAGTAGATACGCCATAGTTCCAGGACAGGCGGCACAGAGACT
GGCCCGATCACAGGATAATCTGGATCGCTATGGCTCCAGACATGGATTGC
ACGAAGAGGAGGAGCCTCACTCCTTCCACGAGGAACCCCATCAGGAGACC
CAGTTTGCCAGCTTGCCACCGATACTTAATTTGCCGCCCAAGCCCAGGAA
TATTAACAACAATACCAATGCCAATCAAACCCAGATTAAGCATGCTTTTA
GTAGCGACTTCGGCAGCAAGACCTTCTTGATAGTGGATAAGAATAGCAAC
CAGAGGTACCAGATGGTGCCCACCGCCGAGGACGAGGAGCTGGTAGACGA
GAACCAGGAGATCATACAGATGCACAATGGCCGCGCCCATCGATATGCAG
TGGTGCCCACGGATGCGGACGACGATGATCTGGCGGAGGAGCAGAGCAGC
AGGAAACCTGCCTGAGCAACATGGAATTGAGCAGCAGTACGCAGCGAGGA
CCTCAACGCCGCAGCAAAGAATGCGGCTGCCGCTACGAGGGCCCTGCACG
AGCTCCTGACCACGCCCAGGAGATGCAGCCGCCTCGCGATTGACGCACTC
ACGCCCCGGAACGCCGCCCACACGAGCACTGCACTTGGAAGGCGCTTGTA
ATCACAAAGCATCGATTCTACCAAGCCCACAGTGGACGTAGTAGAGTCCC
TCACTGGCCACTTCGCGATCGAACTTTCCCCCAGAAA
UFO11257.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:33:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| spdo-RA | 2087 | CG31020-RA | 128..1128 | 7..998 | 4720 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:33:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 30476811..30477781 | 7..971 | 4525 | 99.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:33:04 has no hits.
UFO11257.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-16 11:41:38 Download gff for
UFO11257.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| spdo-RA | 115..1129 | 1..1003 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:20:14 Download gff for
UFO11257.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| spdo-RA | 120..1134 | 1..1003 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:32:49 Download gff for
UFO11257.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| spdo-RA | 120..1134 | 1..1003 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:32:49 Download gff for
UFO11257.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 30476803..30477790 | 1..979 | 98 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:20:14 Download gff for
UFO11257.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 26302525..26303512 | 1..979 | 98 | <- | Plus |
