UFO11259.5prime Sequence
657 bp (656 high quality bases) assembled on 2012-04-16
> UFO11259.5prime
CAGTCGACATGGAATCTGTGAATAAATGCGGTAAAAGCGCATCCACAAGA
AATTGTACGGTGAAAATGAGCCGGAAAATGTGGGTGCTTTCGCTGCTGGC
GCTGGCAGCGCTACAACTGCACTCGGGCAGCGAAGTGGCTGCACATTTGA
ATGTTTTCCTAAATCCCGTGGAAGTAATGCGTTTATTAGGCGTCTCTGCT
GAGGTTTACTACGTTCGCGAAGGTCATATAAATAACTACGCTTTGAACTT
CATTGTACCAGTTCCGGCGAATGTCAAGGACATTAGTTTCACCTGGCAGT
CGCTGGCGGGGCGTGGCCTTCCCTACAGCATCAATGTGGTCAGCTCCGAT
CAGGAAGTGCTTCCTCGACCGGCGATCAATGTGTCACACAGTGGGGAAAT
CCCCACGACCATACAAACCTGGTCCATTGCCCTCAAGTGCAGCGGATTGA
AAGCGGCGGAGGTGGATGTGACTGTCAGCCTGGAAGTGGTGCTCAACCGG
TCACTGAACAATGTAACTCATCTGGTGTTTCGGAGGAAGAAGATCTGTCT
TATGAATGACAGTGCCGAGGATTTGTCGGAGGATGTGGACGATCCCCAGT
TGCTGGAGACCGTAATGTTTACCACCCACTGGATTTGATCACCCTGGGTC
GTTGGTG
UFO11259.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:32:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| dnt-RB | 2639 | CG17559-RB | 389..1034 | 9..657 | 3170 | 99.5 | Plus |
| dnt-RA | 2630 | CG17559-RA | 389..1034 | 9..657 | 3170 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:32:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19340479..19340936 | 647..188 | 2200 | 99.6 | Minus |
| 2L | 23513712 | 2L | 19362658..19362839 | 190..9 | 910 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:32:26 has no hits.
UFO11259.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-16 11:41:31 Download gff for
UFO11259.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dnt-RA | 386..1031 | 9..657 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:19:53 Download gff for
UFO11259.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dnt-RA | 389..1034 | 9..657 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:32:33 Download gff for
UFO11259.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dnt-RA | 389..1034 | 9..657 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:32:33 Download gff for
UFO11259.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19340470..19340934 | 190..657 | 99 | <- | Minus |
| 2L | 19362659..19362839 | 9..189 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:19:53 Download gff for
UFO11259.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19340470..19340934 | 190..657 | 99 | <- | Minus |
| arm_2L | 19362659..19362839 | 9..189 | 100 | | Minus |
