UFO11263.5prime Sequence
1111 bp (968 high quality bases) assembled on 2012-04-16
> UFO11263.5prime
CAGTCGACATGGTTGTAGTTCCAGCTCTAGGCGCCGCCGCCGTTTCCGTG
GGCGGTCTGCTCTTCAAGGCGAGTGCCGCATCTAAGGCGGCGGCGGCAGC
GGGCGTAGCAGCGGCAGGAGCCTCCAAATTGGGCCTGGCCATCGCCGGTG
CTATCAAACTGGCCACCGCTGTTATTGGCGTTGGTAAACTGACCATATTG
CCCTTTCTGATAGCGGCTATAGCCTACTATAATTACGATCTCTTCGATCC
GGAGAATCGACCATTCAACGTGCAGCAAGTGGATTTGGCCTATGATTTCA
TCATCATCGGTGGCGGTTCGGCGGGTACTGTTCTGGCCTCCAGACTATCG
GAGATACCGCACTGGAAGATCCTGCTCCTGGAGGCCGGTGGACATGAGAC
GGAAATCTCCGATGTGCCGCTGTTGTCGTTATATTTGCATAAAAGCAAAA
TGGATTGGAAGTATCGCACCCAACCACAACCGACAGCCTGTCAGGCAATG
AAGGACAAGCGCTGCTGTTGGACGAGAGGCAAAGTTTTGGGCGGCAGTTC
GGTGCTAAATACGATGCTCTACATCAGGGGAAATAAACGAGACTTTGACC
AGTGGGCGGATTTTGGAAATCCCGGTTGGTCGTACGAGGATATACTGCCC
TATTTCCGGAAGTCTGAGGATCAGCGGAATCCCTATTTGGCCAGGAACAA
ACGCTACCATGGCACAGGAGGCCTTTGGACCGTCCAGGACGCGCCATACA
ACACGCCCATTGGACCGGCATTTCTGCAGGCTGGCGAGGAAATGGGCTAC
GATATCGTCGACGTGATGGAGAGCAGCAGACGGGTTTCGTTTCTATCAGT
TCAACATGCGTCGCGGTTCCCGCAGCTCCACGGCCAAATCATTTTTGCGA
CAGCACGTTCTGCGACCCATCTTCTTGTGGCCTTTTTTTCGCATGTCACC
AAGGTCCTAACCGGATCCCATAAGGAGGCGAGCGATTGAGTTCAATTTTA
TACGAGACGGAAGGCTTGCAAAATGTATTATGCCACCAGGGAGTGTATCC
TGTTCGGCAGGACCCTATGATCGTCCGCATCCTGAATGAAGTTGCTCGGG
CATTGCACACG
UFO11263.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:33:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9514-RA | 3099 | CG9514-RA | 417..1516 | 8..1111 | 4865 | 97 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:33:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 14895760..14896218 | 466..8 | 2295 | 100 | Minus |
| X | 23542271 | X | 14888224..14888476 | 718..466 | 1250 | 99.6 | Minus |
| X | 23542271 | X | 14887589..14887926 | 1053..716 | 1025 | 92.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:33:26 has no hits.
UFO11263.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-16 11:41:42 Download gff for
UFO11263.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9514-RA | 414..1472 | 8..1068 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:20:27 Download gff for
UFO11263.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9514-RA | 417..1475 | 8..1068 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:33:00 Download gff for
UFO11263.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9514-RA | 417..1475 | 8..1068 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:33:00 Download gff for
UFO11263.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 14887576..14887924 | 718..1068 | 93 | <- | Minus |
| X | 14888225..14888475 | 467..717 | 99 | <- | Minus |
| X | 14895760..14896218 | 8..466 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:20:27 Download gff for
UFO11263.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 14781609..14781957 | 718..1068 | 93 | <- | Minus |
| arm_X | 14782258..14782508 | 467..717 | 99 | <- | Minus |
| arm_X | 14789793..14790251 | 8..466 | 100 | | Minus |
