UFO11264.5prime Sequence
1109 bp (1004 high quality bases) assembled on 2012-04-16
> UFO11264.5prime
CAGTCGACATGTGGATCATTTTCCTCATCATCGGATTGCTGGTGCTCGGG
CTGCTGGTTCTGCTAATTATTGCGGCGCGGTATCAGCGAGATTATTGGCG
CTATCTGGACATTCCACACGAGAGACCCAAAAAGCTATGGCCTATCATTA
GGCAAATAATGACGCAGACATTGAGTACGGAGGCTATGAAGGCGGAGCAC
TACTCGGCCATATACAAGAAGTTCAAGGGAAGCGGTCCCTTCTGCGGATT
CTACGCCCTGTTGCAGCCACGCGCATTGATCCTCGATCGGGAGCTGATTA
GGCAAATAATGATCAAGGACTTTTGGAACTTTAATGATCGAGGATTGTAT
TGCAATCAAAAGTCGGATCCTTTGTCGGGTGATCTGTACGCTTTGCGGGG
AGAGAGCTGGAAGGAGATGCGTCAGAAATTGGATCCAAGTCTCGAAGGTG
ATCGCATGTCCTTGCTGTATGACTGCCTGTACGAGGAGGCGGAACAGCTT
CTCTTGACAGTCAATAGCACCCTAATGAGCCAGCCCCATTCCACCGTTCA
CATACAAAAGATTATGAGGCGTTATGTGCTGTCTTCGTTGGCCAAATGCG
TTTTTGGTTTGAATGCCGAACAGAGGAAAACGTATCCTCTGGAGGATTTT
GAGCAGATGACCGAGCTGGCCTTGAATAGCCACAAACATGGCTACCTAAT
GAACCTGATGATGATCCGGTTCCCCAACTTTTGTCGAATGTTGCGCATGC
GTCGCACGCCCAAACAGGCGGAGGAGTATTTTATTAAGCTCCTTACGAGT
ATTGTGGAACAACGAGAGACGTCCCGGAAAGCCTCAGAAGACTACTTACA
ACTTTTGATCGACGTCAAGGCACTGGAGTTTATTACCCACCAGTATGAAG
CGGATAGACTAGTTGCCCATCTGCAGACGAGTTGGCCGCCCATGCAGTGT
TCTTCTTGAGGCGGGCTACGAGCAACGCCACACTCTTATCATATGTACTC
TATGAGCTAGCATGCATCAGATTGCAGTACGTGTGGCGGGAGAGGTTCAG
ACGCATCGAGCGACTGATGTCCCATTACCATGAAGCCATAGTCGCTAGGT
TCATGGTCA
UFO11264.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:33:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp317a1-RC | 3904 | CG17453-RC | 302..1420 | 7..1106 | 4850 | 96.8 | Plus |
| Cyp317a1-RB | 2078 | CG17453-RB | 476..1594 | 7..1106 | 4850 | 96.8 | Plus |
| Cyp317a1-RA | 1904 | CG17453-RA | 302..1420 | 7..1106 | 4850 | 96.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:33:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14899493..14900506 | 7..1013 | 4575 | 98.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:33:30 has no hits.
UFO11264.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-16 11:41:42 Download gff for
UFO11264.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp317a1-RA | 1..1051 | 9..1049 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:20:29 Download gff for
UFO11264.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp317a1-RA | 298..1354 | 1..1049 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:33:02 Download gff for
UFO11264.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp317a1-RA | 298..1354 | 1..1049 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:33:02 Download gff for
UFO11264.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14899489..14900506 | 1..1013 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:20:29 Download gff for
UFO11264.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10786994..10788011 | 1..1013 | 98 | == | Plus |
