UFO11265.5prime Sequence
1118 bp (1002 high quality bases) assembled on 2012-04-16
> UFO11265.5prime
CAGTCGACATGGTAGCTAAATGGTTGAAACGGCTGGACGAGGTGAAAGGT
GAAGAGAAATCCCAGCAGGACAAAGAAATGGAATCCGAGTCACCAGCTCA
GAACCAAGAGAAACAGAAAGTACTAGCTAACCCATCAGTTGTGGACCTTT
GCAGCGATGAAGAAGTTGAGAAATCAGTTGTTCGTTTTCGTGATATGGAA
ACACTGGACGTGGAATCAGTTATCCCCAATTCCTCGCTTATGGTCCTTGA
CGATGAGCTGGGCGAGATCACCCTGCAGGACTATGCTGATCACATCAATG
GAAAATTGGATGAAGCGTCTTTGAGGAAGCGAAATCGCCGGGAGGAGGAT
AGCCCATCTCATAACGCCAAAAAACAGAGATCGATAAAAGAGTTTTTGAC
TCCCAAGAAATCAAAGCAAGGCCAAACATCATCTTTTGCCTTCCAGCGCT
GTTTGAAAACGTATAGCAGACGACCAAAGCTAGAAAATTATACAAGTGGC
GAAGCAGGCGGTATCACATCCAACATAGTTATGGTTGATGAAAGTCAAGA
AGAAGCCCGCGAATCTCTTATAATTGATAATCCAAAACCAAAAACCCCAA
CAGATTGGAGGGAGCCTAACCAAAGTGATATCATGAAAGAGGTATCAAAT
TCCGACGACTTGATCGAGAAAGAAACTTCACCCTGTGATCCCTTAGCAAG
CTTAGATATTAATGTTCCAAGTAAATCCGACCCAGAAGTGCCTTCTGAAA
TTTATGGAGAAGCGAACAAAAATATAAACATATTGAACGAATCACCAAAG
AACATGCCGCTCCTGAAGGACATACTTTCAACTGACCCAGAGGCTCATAA
AGAAAATAATCCTGATATGAGTATACACCAGAAGTTCCCACCCAATCCCC
AATAAATGCGATACGAATTCGGTAGTGACCTGGTTCCCTACGGCAGAGAT
TATGATTCGGTTCGCACTGACCTGTTGCAGAGCAAGTTGACCCGTCTGAC
CTTCCAGGCACTGGGAACAGCTGAAAAGCTAAGTGTTACCGCCAGAAACA
TGGCATTAGCTTACGGCGAAAACCACGACTTGATGACATATATTCCCCAC
TTCATGGAACACCTCAAG
UFO11265.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:33:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17129-RB | 2310 | CG17129-RB | 444..1541 | 9..1097 | 5015 | 97.8 | Plus |
| CG17129-RA | 2379 | CG17129-RA | 513..1610 | 9..1097 | 5015 | 97.8 | Plus |
| CG17129-RC | 2201 | CG17129-RC | 335..1432 | 9..1097 | 5015 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:33:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 678704..679745 | 1045..9 | 4795 | 98.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:33:33 has no hits.
UFO11265.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-16 11:41:43 Download gff for
UFO11265.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17129-RB | 440..1498 | 9..1060 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:20:31 Download gff for
UFO11265.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17129-RC | 335..1393 | 9..1060 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:33:04 Download gff for
UFO11265.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17129-RC | 335..1393 | 9..1060 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:33:04 Download gff for
UFO11265.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 678718..679745 | 9..1033 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:20:31 Download gff for
UFO11265.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 678718..679745 | 9..1033 | 99 | | Minus |
