UFO11286.5prime Sequence
1117 bp (1020 high quality bases) assembled on 2012-04-16
> UFO11286.5prime
CAGTCGACATGGCCTCTAAGGCCATTTGGTTGACTATACTCCGCTTTATG
GGCGACTTGCCGGATGTTGTTTCCTCGCCTACTCTTCACGTATTCGATAA
TGAAAACTTGATGAGTGATTTGGCAAGCCTCTTGAACACTTCTGATTCCT
ATAAGCCTCGCTTATTTGTGCGCCAATCCCAAAGACGTATCCCAAAGCCT
TTGGCTAGTGGTGAGAAGGAAGCCCAGGAATTCTATCAACACTGGCTCAA
CGTTCCCACAAGTCACCTGGAGAAAATTCACTTCATCATAGGTCATGGTA
TAATAAAGAATAGCTTACGAGACGAAATCTTGGCCCAGATCTGCAAGCAG
CTATATCTTAACCCAAGTCGGAGCTCCTACTCCCGCGGATGGTTGCTCCT
TTCGCTATGCCTCAGCTGCTTTCCACCCAGCAAGGAGTTTGAGCCACACT
TGCGCAGTTTCATGAAGCAGGGAACTGCCCAACTGCAGGCCACTCCATCC
CTGCAGCGATTGGAGCGAACCCTGGTCAATGGACCACGCTGTCAGCCACC
TTCGTTATTTGAGCTCCACGCAATCCGCGGTCGCCACCCGCTTAGGTTGG
ACATTCACCTGATGGATGGGCAGCAGAGAAGATTGCAGGTGGATGCGGCC
AGTACAGCTCGAGAGGCAGTCAATCAACTTTGTCAGGGTATGGGGCTAAC
CGACACCTTTGGCTTTGGATTGGTGATGTCATTGAATGGGAAGCTAATGC
CGCTGGGAGCAGGTCAGGAGCATGTCCTGTATGCCATTTCGGAGTGCGAG
CAACGTCAGCTGGATGCACCTTGGAAACTATACATCCGAAAGGAAATGTT
TGCCACTTGGTATGATCCCTCGATGGATCCCAAGGCCACTCAACTTATAT
ACAAGCAAATTCTAAACGGGTTGAAGTGCGAGAGTATCGATGTCGCTCGA
GAGGACATAGCAATGTGTGTGCTCTGGCTGCTTTGTAGATATGGACTTGG
GGAGATCTCGATGAGCATCGAGATCCTGCAATTTGTCCAGTGATCTTCTA
GCTCCGGCGAGCGAACATGAGAACTGAGTCGCTATAGCTGCACTACGGAG
AGCTCTTATGTTCCAAG
UFO11286.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:34:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Myo28B1-RA | 6588 | CG6976-RA | 3323..4449 | 9..1111 | 4955 | 97.4 | Plus |
| Myo28B1-RB | 6443 | CG6976-RB | 3178..4304 | 9..1111 | 4955 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:34:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 7686387..7687080 | 319..1006 | 3140 | 98.8 | Plus |
| 2L | 23513712 | 2L | 7686025..7686325 | 19..319 | 1505 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:34:48 has no hits.
UFO11286.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-16 11:41:55 Download gff for
UFO11286.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Myo28B1-RE | 288..1425 | 1..1117 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:21:09 Download gff for
UFO11286.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Myo28B1-RB | 3172..4309 | 1..1117 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:33:35 Download gff for
UFO11286.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Myo28B1-RB | 3172..4309 | 1..1117 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:33:35 Download gff for
UFO11286.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 7686025..7686325 | 19..319 | 100 | -> | Plus |
| 2L | 7686388..7687208 | 320..1117 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:21:09 Download gff for
UFO11286.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 7686025..7686325 | 19..319 | 100 | -> | Plus |
| arm_2L | 7686388..7687208 | 320..1117 | 96 | | Plus |
