UFO11288.5prime Sequence
1124 bp (996 high quality bases) assembled on 2012-04-16
> UFO11288.5prime
CAGTCGACATGTTGAGGAATTTGTTAAAGTCACGTTTCCCGGCACCGCGC
AGCATGTCCTGCTTCTCGCACGTGATGAACCCGATAACGGGGCAGAACTC
CTGGCAGGAGCGCGGCGATGACTACGACTACCACCTGGAGGTGGCCAACG
CCGGATTCGGCGACATGCTGCACGACTGGGAGCGCAACCAGAAGTACTTC
GCCGCTCTGAGAAAGACCATAGCCGGAATGCGTGAGGCGGGCAGGGAGGT
GCACGTGCTGGACATCGGCACGGGCACGGGAATCCTGTCGATGATGGCCT
TGGCAGCAGGAGCGGATTCGGTGACCGCTTGCGAGGCCTTCCTGCCAATG
GCCAATTGCGCGGAGAAAATTCTGGCGGCCAACGGAGCTGGCGACAAGGT
GCGTCTCATCCGAAAGCGATCCACAGAGATCCAAGTGGGCGAGGATATGC
CGCGAAAGGCGAATCTGCTAGTGGCCGAGCTGCTGGATACAGAACTGATT
GGCGAGGGTGCCATCGGCATCTACAACCATGCCCACGCCGAACTGCTGAC
CGAGGACGCTCTCTGCATTCCCGCGCGCGCCAGATGCTATGCCCAGGTGG
CGCAATCTCCGCTAGCTGCGCAGTGGAACAGCCTGAAAACGATTGCCAAC
TTGGACGGCGAACCTTTGCTGCACCCACCGGAGCAGCTGAAGAGCTGCCA
AGGAGAAGCTGCGCTGCACGACGTCCAGCTGTCGCAGCTGCCAAGCTCCG
CATTCCGCCCGCTCACCGATCCCGTCGAGATCTTCCAGTTCGATTTCCAG
CGCAAGCAGGAGCGGGAGAAGCAGCGGTCGCAATTACTAAAGCTGCAGTC
CAAGCAACCGGGAGCCGCTGAGCTGGTCTTCTACTGGTGGGACATTCAGC
TGGACGATGACGGGAGATATTGCTCAGCTGGTGCTCCTTACTGGGCGCAT
CCACAGCTGAGGAGCTGGCAGCTGAGAGGCGAGGATCATCCGCTGCCATG
GTGGTGCCCTGGCGGGATCACTGATGCAGGCATTCTACTACCTACCCAGG
CCCTGCCACTGCTCGAGGCAGGTTAATTCCTCCACTCAGCTGCCACCACG
ATGGAGTTACCCTCCCTTGTTCGA
UFO11288.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:34:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Art7-RB | 2230 | CG9882-RB | 21..1122 | 9..1103 | 5140 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:34:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23077917..23079018 | 1103..9 | 4915 | 98.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:34:58 has no hits.
UFO11288.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-16 11:41:57 Download gff for
UFO11288.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Art7-RB | 13..1130 | 3..1117 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:21:13 Download gff for
UFO11288.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Art7-RB | 15..1132 | 3..1117 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:33:39 Download gff for
UFO11288.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Art7-RB | 15..1132 | 3..1117 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:33:39 Download gff for
UFO11288.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23077907..23079024 | 3..1117 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:21:13 Download gff for
UFO11288.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18965430..18966547 | 3..1117 | 97 | | Minus |
