UFO11290.5prime Sequence
1123 bp (1005 high quality bases) assembled on 2012-04-16
> UFO11290.5prime
CAGTCGACATGCGGTGCAGGATCTTGGTGCTGTGTGCATTCATATGCCTC
CTTGTAATTTTGACCGAGGCCAGGCAGAGGAAAGTTAACCATTCCGCTGA
TAGAAGATCATTGGCAGTCAGAAGTGGACACAGGAATGAGCGGAGTAGTG
CTCTTCATGGAAGAGGATTGGCTGCACGATCAAGGAATCAAAGGAAACGC
AGATTAAATGCTGCCAAGAGAAGCAGGAGGAAGCGTAACTTGGCTAGAAA
GTCAAATCGGAAAATTAGGGCCAAGACCGAGTCAATCGTTAGAAGTGATT
CTAGTTACGCTACTTTACCATTGGACTTCCAACAGAACTTCGTGCGAACC
ACCGACAACCTGCGATCGGAGAAGGCCTTTTTGGCCAATCGATATGGCTT
TAGTTTTGCCAAAAGTTCTGGAACGGCTACTTTGAAAAACACGGCGAACA
TGGAGTATACCTGCAAAATGAACATTGGTACACCCAAGCAGAAGTTCACA
GTTCTTCCGGACACCGGAAGTTCGAATATTTGGGTGCCAGGACCGCATTG
CAAGAGTAAGGCCTGCAAGAAACACAAACAATATCATCCGGCCAAGTCAA
GTACCTATGTTAAGAATGGGAAATCCTTTGCCATCACCTACGGTTCGGGT
AGTGTGGCAGGAGTTCTGGCCAAGGATACGGTGAGAATAGCTGGGCTGGT
TGTGACCAATCAAACTTTCGCCATGACCACCAAAGGAACCGGGAACCACT
TTCGTGACCTCAAATTTCGATGGTATACTAGGGCTGGGATATCGATCCAT
AGCGGTGGACAATGTGAAGACCCTGGTGCAGAATATGTGCTCGGAGGATG
TGATCACCAGTTGCAAGTTTGCCATTTGCATGAAGGCGGCGGCAGTTCCT
CTCGAGGTGGTGCAATAATCTTCGGCAGCTCAATACAGTGCTTATAGCGG
ATCCATAGCTACACATACACTCCGGTGACCAAAAGGTACTGCAGTTCCCC
TCTGCAGACATTACGGTGGGGCGCACCAAGTGGAGCGCTCGTGCAGCATG
TGGATTCCGACTTCATGGATCCAGGCTCGACGCATTCTTACACAGATCAC
AGGTCATCGATTGCAGCCTACCT
UFO11290.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:35:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17283-RA | 1585 | CG17283-RA | 6..1083 | 8..1071 | 4830 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:35:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 17407881..17408860 | 8..984 | 4655 | 99.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:35:06 has no hits.
UFO11290.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-16 11:41:58 Download gff for
UFO11290.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17283-RA | 1..996 | 9..997 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:21:16 Download gff for
UFO11290.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17283-RA | 1..1002 | 5..997 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:33:42 Download gff for
UFO11290.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17283-RA | 1..1002 | 5..997 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:33:42 Download gff for
UFO11290.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 17407874..17408877 | 1..997 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:21:16 Download gff for
UFO11290.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 13233596..13234599 | 1..997 | 98 | | Plus |
