UFO11316.5prime Sequence
1139 bp (1009 high quality bases) assembled on 2012-04-23
> UFO11316.5prime
CAGTCGACATGGCATCTGGAATTAATTTGAGCCGCGAGTGTCAGCACGTG
TTCGAGCAGATCCGGAAGCTGAAGCAACATCGCTACGCGGTCTTCGTCAT
CCAGGACGAGCGGGAGATTAAGGTGGAGGTGCTTGGAGTAAGGGAGGCGA
ACTACGACGACTTCCTGGCGGATCTGCAACGTGCCGGATCCAATCAGTGC
CGATTCGCTGTCTACGACTATGAGTATCAGCACCAGTGCCAGGGCACCTT
GTCCACCTGCCTGAAGGAGAAGCTAATCCTGATGCTCTGGTGTCCCACTC
TGGCCAGGATCAAGGACAAGATGCTCTACTCCAGCACGTTTGCGGTGCTC
AAGCGAGAGTTTCCCGGCGTCCAGAAGTGCATTCAGGCCACCGAACCGGA
GGAGGCGTGCCGCAATGCTGTCGAGGAGCAGCTGCGCTCCTTGGACAGGG
AGGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGT
CATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATC
CTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGC
AACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGA
TCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCT
GCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGG
AAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCAC
CTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGA
GTTGTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGG
GATTGGCTGAGACGAAAAACATATTCTCAATAAACCCTTTAGGGAAAAAG
GCCAGGTTTTCACGTAACACGCCACATCTTGCGATATTTGTGTAGAACTG
CCGAAATCGTGTTGTATTCACTCCAGAGCGATGAACGTTCAGTTTGCTCA
TGAAACGGTGTACAGGTGAACACTATCCCATTATCACCAGCTCACGGTCT
TTCCATGCATTCGAATTTCGATGACTCATCAGCGCAGAA
UFO11316.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:36:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6873-RA | 680 | CG6873-RA | 171..615 | 8..452 | 2225 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:36:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18739281..18739725 | 452..8 | 2225 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:36:09 has no hits.
UFO11316.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-23 10:28:05 Download gff for
UFO11316.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6873-RA | 164..615 | 1..452 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:21:49 Download gff for
UFO11316.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6873-RA | 164..615 | 1..452 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:34:04 Download gff for
UFO11316.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6873-RA | 164..615 | 1..452 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:34:04 Download gff for
UFO11316.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18739273..18739729 | 1..465 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:21:49 Download gff for
UFO11316.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18633306..18633762 | 1..465 | 97 | | Minus |
