UFO11319.5prime Sequence
1118 bp (1020 high quality bases) assembled on 2012-04-23
> UFO11319.5prime
CAGTCGACATGCTCCCCAACGATAAAAAAGGTTTTAAAGCAGCAAAGAAC
GATAAGTTCTCGACCCATGCCCTCCTCAATGAGAATGACAACGACCAATC
ACTAAGCTCCGATGAGCAGGACGACATATTTTTCCTGATCTATCGGAAGG
CACATACTTTGTTCCAGGCAGGAAAGTTATGGATGAGGCGTATGCGTTAT
CACGATGCACAAAGGGCATTTGAGAAAGCGATAACACGCTTGAAAACTTG
CAAAACTAGCAGTTTCGAACAGCAGTGCCGTAAAAAAGATATGCTTATCG
CCCTTTTCGAAAGCTTGATGATCTGCTTCAACAAGATGAGGCAGTCCAGG
TGCGTCTGCTATGTCATGAAGGAACTTCGTCTCCTGACCATCAATAATCC
TTCGGCTTTGGCGCTCTGTCAGCACGGTCGTGCCCTAAGCGACTTGGGTA
AATACCATCCATCCCGTTTGTGCTACATAAAGGCGTTGAAAAAACGTCCT
AGAGACCAGGGTATCAAGGATAAGATTACCAGAATCAGCAAGAGAATCAC
AGAACTTGAGGATACCAATCAGATGCTTTCTCAGCTGAGTATAGCAAGCT
TTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCAT
AATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATG
ACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCG
TTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAAC
AGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCAT
CGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGAAAGCCATCA
CAACGGCATGATGAACCTGATCGCCAGCGGCATCAGCACCTTTGTCGCCT
TGCGTAAATATTTGCCCATGGTGAAAACGGGGCGAAGAAGTTGTCCATAT
TGCCACGTTTAAATCAAACTGTGAACTCCCCAGGGATGCCTGAAACGAAA
ACATATTCTCATAACCTTTAGGGATAGCCAGCTTCACGTAACGGCCATCT
GCAAATTGTGTAACTGCG
UFO11319.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:36:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30075-RA | 703 | CG30075-RA | 45..629 | 9..593 | 2925 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:36:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14376019..14376603 | 9..593 | 2925 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:36:13 has no hits.
UFO11319.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-23 10:28:06 Download gff for
UFO11319.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30075-RA | 45..632 | 9..597 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:21:51 Download gff for
UFO11319.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30075-RA | 45..632 | 9..597 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:34:07 Download gff for
UFO11319.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30075-RA | 45..632 | 9..597 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:34:07 Download gff for
UFO11319.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14376019..14376606 | 9..597 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:21:51 Download gff for
UFO11319.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10263524..10264111 | 9..597 | 99 | == | Plus |
