UFO11323.5prime Sequence
953 bp (953 high quality bases) assembled on 2012-04-23
> UFO11323.5prime
CAGTCGACATGGAAGTGGAAATGTGGTTCAAAATATCAGCACTTCTCAAG
GCTGTAACAAAAACTGCACTCTGTTTTTATAAATACAAATATCCACAAAT
ATCTGGTCTTAACATGGCAACATTTCAAGTCTTCCAAGCAAGCTTTCTAG
ACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCAT
AATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGT
GCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGA
ACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGT
CCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGT
ACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACG
GCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGT
ATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGG
CCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACG
AAAAACATATTCTCAATAAACCCTTTAGGGAAATAGGCCAGGTTTTTCAC
CGTAACACGCCACATCTTGCGAATATATGTGTAGAAACTGCCGGAAATCG
TCGTGGTATTCACTCCAGAGCGATGAAAACGTTTCAGTTGCTCATGGAAA
ACGGTGTAACAAGGGTGAACACTATCCCATATCACCAGCTCACCGTCTTT
CATTGCCATACGAAATTCCGGATGAGCATTCATCAGGCGGGCAAGAATGT
GATTAAGGCCGGATAAACTTGTGCTTATTTTTCTTTACGGTCTTTAAAAA
GCCGTAATATCCAGCTGAACGGTCTGGGTATAGGTACATTGGACAACTGA
CTG
UFO11323.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:35:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Acp33A-RA | 340 | CG6555-RA | 188..316 | 9..137 | 645 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:35:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 11591363..11591491 | 137..9 | 645 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:35:53 has no hits.
UFO11323.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-23 10:28:02 Download gff for
UFO11323.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6555-RA | 184..325 | 3..146 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:21:41 Download gff for
UFO11323.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15841-RA | 184..325 | 3..146 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:33:58 Download gff for
UFO11323.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Acp33A-RA | 184..325 | 3..146 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:33:58 Download gff for
UFO11323.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 11591363..11591495 | 3..137 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:21:41 Download gff for
UFO11323.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 11591363..11591495 | 3..137 | 97 | | Minus |
