UFO11326.5prime Sequence
1027 bp (982 high quality bases) assembled on 2012-04-23
> UFO11326.5prime
CAGTCGACATGAACGATTTCGGGCAGTTCGCTAAGTCGCAAGGCCCAAAG
TTGGTGCCATTCCTGGTTACTATTGTCCTATACTTCTCGCTGGTGAGGAA
GGATCCTCAAGGAGAGCTATGGACCACCGTGCTCAAATGCCTGCCCATTT
TCGCGCTTGTATTCTATGTGGTGGCCAAGGGAATCTCGCTCAAGAAGGAA
TACCGTCGCTCACTTTGGATTCTATTGGGTCTGGTTTTCTCGAGTGGTGG
TGATGCTCTGCTCAACATAAATCTCTTTCCCTTCGGAATGATCTCCTTTG
GAGTGGCGCACGTGTTTTATATCAGCGCCTTTGGCTGGAAGCCCATAAAG
TGGTTCATTGGACTGCTCTTGTACGTGGCCGTATCGCTTTGTAAGTTTAC
TGGTCATTATATACGTATACCTTACCTGGAATATTTGAAACCCCCAGTTG
TTTACTTCGTGCACACGAAACTGGACGAGATTCTCATCATCGGAGTGCCC
ATCTACTGTTTCCTGATCACCACAATGCTGTGGAGATCGCTGGCCCGCGC
CGTGGACTCCAGGAACTTCCTCGCCGTGTTCTGTGCCATCGGAGCCATTC
TGTTTGTGATCTCCGACGCCCTGATCGCGGTCACCATGTTCGTGGGCGTG
CCCCTGCCCTGCGCCCGCCTCCAGATCATGATCACCTACTACGCCGCCCA
GTTTGCCATTGCGCTGAGCACCGCGGACGACGGTCCTGCCCTCCAGCGCT
CCCTTCGCAAGAAAATTAAGGCAAGCTTTCTAGACCATTCGTTTGGCGCG
CGGGCCCAGGTAAGGTGGTCATAATCATAATCATAATCATAATCATAATC
ACAACTAGGCTAGGAGATCCTGCGTCATGACTAGTGCTTGGATTCTCACC
ATTAAAAAACGCCCGGCGGCACCGAGCGTTCTGACAAATCAGATGGAGTC
TGAGGTCATTACTGAATCTATCAACAGGAGTCCAAGCGAGCTCGATATTC
AAATTTACGCCCCCGCCCTGCCATTAA
UFO11326.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:36:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7582-RA | 1190 | CG7582-RA | 176..937 | 9..770 | 3810 | 100 | Plus |
| CG7582-RB | 979 | CG7582-RB | 43..403 | 30..390 | 1805 | 100 | Plus |
| CG7582-RB | 979 | CG7582-RB | 404..726 | 448..770 | 1615 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:36:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 29680494..29681064 | 770..200 | 2855 | 100 | Minus |
| 3R | 32079331 | 3R | 29681127..29681296 | 199..30 | 850 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:36:43 has no hits.
UFO11326.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-23 10:28:10 Download gff for
UFO11326.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7582-RA | 168..943 | 1..776 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:22:03 Download gff for
UFO11326.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7582-RA | 168..943 | 1..776 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:34:18 Download gff for
UFO11326.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7582-RA | 168..943 | 1..776 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:34:18 Download gff for
UFO11326.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 29680488..29681064 | 200..776 | 99 | <- | Minus |
| 3R | 29681127..29681296 | 30..199 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:22:03 Download gff for
UFO11326.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 25506210..25506786 | 200..776 | 99 | <- | Minus |
| arm_3R | 25506849..25507018 | 30..199 | 100 | <- | Minus |
