UFO11333.5prime Sequence
1159 bp (989 high quality bases) assembled on 2012-04-23
> UFO11333.5prime
CAGTCGACATGGAACGTTCGCACAGCTGTAGCAATTTCGAGGGCAGGACG
GGAGCCAAGGTCATCGTTGGCGCAGTGGAGCAATTGGCCGGCAGCAGTGA
GCACCTGCCCAGCGTCCACTTTCCGCCCAGCAAGCCGCTGCGCAGGCGCA
GAAAATTGCAGCGACAGCAGAGTGCCGTCGATACGGATGACATGGAATAT
GCCGCCGATCTGGAGGAGAATGCCGATCCGGATGCACATGAGCATATGTC
GCCCGTCGTCACCATGCCCATGCGCCATATATCTGCCACCAGTACGCGTT
GCCTGCGCCACGAGGAGTCCTTTGAGTCATCCAGCACGGCGCCCGAACTG
AGTCCGCAGGCGCAGAGGCAACAGCGCTTCAGTAGTCTGCTCCTGCGTGA
CAGCTCCGTATCCGTGCAGTCGGACTCGAGTCGATATTCCAGCGTGGACA
GCTTGCTGGAGGCACGCAAGCCAGATCCCGAGGCCATACTCATCAACCTG
GGCTTTGGACCGCTCAGCTCCGAGGATATGCTGTCGCGGATACCGCGGAG
GTTTCTGAAGCCCTCGCAAGTGCCTGGCATCGATACGGATGCCTTTGTGC
AAAGACTGACTCTGGCGCGATCCCTGGCCGATTCGAGTGTTCTGGGCTAT
AGGGGTCTAACCGGAAATCCGGACATGCCGCCCTCCTCAATTGTGGCCAG
CATTATGAAGCGATTCGAGGTCAATCATCATAGGAAAAACTCCATGGGCT
CCATTAAAGCCCAGCATACAAGCAAGCTTTCTAGACCATTTCGTTTGGCG
CCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAA
TCACAACTAGCCCTAGGAGATCCTGGTCATGAACTAGTGCTTGGATTCTC
ACCAATAAAAAAACGCCCGGGCGGCAATCGAGGCGTTCTGAACAAATCCA
GATGGAGTTCCTGAAGGTCATTACTGGAATCTTATCACAGAATTCCAGCG
GAGCTCGATATCAAATTACGCCCCGCCCTGCACTTCATTCGCAGTACTGT
TGTATTTCATTAAGCATCTGCGAACATGGTAGCATTCCCAAACGGACTGG
ATGAACTTAATCCGCAGGCCGAATCGGCACCTGCTCGCCTTGGCTATAAA
TCTTTGGCA
UFO11333.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:37:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| olf186-M-RA | 1746 | CG14489-RA | 733..1495 | 8..771 | 3795 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:37:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17847431..17848193 | 8..771 | 3770 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:37:02 has no hits.
UFO11333.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-23 10:28:14 Download gff for
UFO11333.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| olf186-M-RA | 723..1499 | 1..777 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:22:14 Download gff for
UFO11333.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| olf186-M-RA | 725..1501 | 1..777 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:34:25 Download gff for
UFO11333.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| olf186-M-RA | 725..1501 | 1..777 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:34:25 Download gff for
UFO11333.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17847423..17848199 | 1..777 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:22:14 Download gff for
UFO11333.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13734928..13735704 | 1..777 | 99 | == | Plus |
