Clone UFO11358 Report

Search the DGRC for UFO11358

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:113
Well:58
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG31814-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO11358.5prime Sequence

1123 bp (1021 high quality bases) assembled on 2012-04-23

> UFO11358.5prime
CAGTCGACATGGCCATGGCAGGACCCCACCGCCTGCCACGCCCACATACA
CGCCGCCGCTTCCGCCTACAGGCGGAGTTTAACGTCCGGCAGTTGGCCAT
CACGATAATAGCCACTGCCGCGGTTACCATGCTGATGACAGCCACGCCCA
CCCTCGCCGAAATCCCCTCAAAGGGAAAACACACGCGACTGGACACCCAG
CAGACGGCACAGGAAGATTCCGACTTTCCGCGATTCGCGGAACCCATTGC
CAATGTCACCGTTTCCGTGGGTCGAGATGCTCTAATGGCATGTGTGGTGG
AGAACCTTAAGGGATACAAGGTGGCCTGGGTGCGGGTGGACACGCAGACG
ATCCTGTCCATTCACCACAACGTGATCTCGCAGAACAGCCGCATCAGCCT
GACCTACAATGACCATCGATCGTGGTACTTACACATCAAGGAGGTTGAGG
AGACGGATCGCGGTTGGTACATGTGCCAAGTGAACACGGATCCCATGCGC
TCCAGGAAGGGCTATTTGCAGGTGGTGGTTCCACCGATTATTGTCGAGGG
CCTGACCAGCAACGATATGGTGGTGCGCGAGGGTCAGAACATCTCGCTGG
TTTGCAAGGCACGTGGCTATCCGGAGCCCTACGTCATGTGGCGACGCGAG
GACGGCGAGGAGATGCTAATTGGCGGGGAGCACGTTAACGTGGTCGACGG
TGAGCTGCTGCACATCACCAAAGTGAGTCGCCTGCACATGGCCGCGTACC
TGTGCGTCGCCTCCAACGGAGTCCCACCTTCGATTAGCAAACGGGTCCAC
CTTCGTGTGCAATTTCCGCCGATGCTATCCATACCCAATCAGCTGGAGGG
AGCCTATCTGGGCCAAGATGTTATACTCGAGTGCCACACGGAGGCCTATC
CAGCATCGATTACTATTGACCACGGAACGCGAGATATGATCATATCGGAC
ACCTCGCGAGCCGGCGATAAATACGAGACCACATCGAACGTCAGCGGTTA
CACAAGTACATGAGTGAAAATCGTTGCCGTGACCCACGATTCGGCCATAT
CGCTGCTGACAGAATCGCTGGGCGGAACGATGAAAAATAAAACTGAACAA
TGCCACCACCAGCATCATTTCCG

UFO11358.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:37:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG31814-RB 2709 CG31814-RB 473..1595 8..1111 5020 97.4 Plus
CG31814-RA 3841 CG31814-RA 328..1450 8..1111 5020 97.4 Plus
CG11320-RB 1327 CG11320-RB 370..550 317..497 245 77 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:37:45
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 13690084..13690291 422..215 1040 100 Minus
2L 23513712 2L 13713972..13714139 175..8 840 100 Minus
2L 23513712 2L 13689586..13689746 688..528 790 99.4 Minus
2L 23513712 2L 13689356..13689485 813..684 650 100 Minus
2L 23513712 2L 13687521..13687658 948..814 540 97.8 Minus
2L 23513712 2L 13689947..13690014 489..422 340 100 Minus
2L 23513712 2L 13684492..13684549 1005..948 275 98.3 Minus
2L 23513712 2L 13690490..13690532 216..174 215 100 Minus
2L 23513712 2L 13689845..13689885 528..488 205 100 Minus
Blast to na_te.dros performed on 2014-11-28 02:37:46 has no hits.

UFO11358.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-23 10:28:22 Download gff for UFO11358.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31814-RA 316..1346 4..1030 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:22:34 Download gff for UFO11358.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31814-RA 326..1356 4..1030 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:34:46 Download gff for UFO11358.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31814-RA 326..1356 4..1030 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:34:46 Download gff for UFO11358.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 13689845..13689884 489..528 100 <- Minus
2L 13689948..13690013 423..488 100 <- Minus
2L 13713973..13714141 4..174 98   Minus
2L 13690084..13690289 217..422 100 <- Minus
2L 13690490..13690531 175..216 100 <- Minus
2L 13684492..13684548 949..1005 98 <- Minus
2L 13687521..13687658 814..948 97 <- Minus
2L 13689356..13689484 685..813 100 <- Minus
2L 13689590..13689745 529..684 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:22:34 Download gff for UFO11358.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 13713973..13714141 4..174 98   Minus
arm_2L 13684492..13684548 949..1005 98 <- Minus
arm_2L 13687521..13687658 814..948 97 <- Minus
arm_2L 13689356..13689484 685..813 100 <- Minus
arm_2L 13689590..13689745 529..684 100 <- Minus
arm_2L 13689845..13689884 489..528 100 <- Minus
arm_2L 13689948..13690013 423..488 100 <- Minus
arm_2L 13690084..13690289 217..422 100 <- Minus
arm_2L 13690490..13690531 175..216 100 <- Minus