UFO11369.5prime Sequence
1170 bp (1039 high quality bases) assembled on 2012-04-23
> UFO11369.5prime
CAGTCGACATGGACGAGCTGCAGAAGTTGGAGTACCTTTCGCTGGTCTCG
AAGATTTGCACTGAGCTAGACAACCACTTGGGCATCAACGACAAGGACCT
GGCCGAGTTTATCATCGATTTAGAAAACAAAAATCGCACATATGACACAT
TTCGCAAGGCTTTGCTGGATAATGGCGCCGAATTCCCAGACTCCCTGGTC
CAGAACCTGCAGCGCATCATTAATCTTATGCGCCCCAGCAGACCTGGCGG
CGCTAGCCAGGAGAAAACTGTCGGCGACAAGAAGGAAGACAAGAAATCGC
AACTTTTGAAAATGTTTCCCGGCCTCGCTTTGCCCAATGACACCTACAGC
AAAAAGGAGGAGAGCGATGACGATGAGAAGGTGAAGGCGAAACCGGAGAA
GCATTCCGAAACGCACAAAAAAACCGATATGAGCGATGTGGATGCAGCTA
TGATGGAGCTGGAAGCGCTGGCCCCTGGCGAGGGTGCCACATTGGTAAGA
CCACACAAAGAAGTCAGTTCCAGGGACCGCCACAAGCGCCGAAGTAGGGA
TCGAGACACAAAAAGAAGAAGTAGGTCGCGGGAGGATAGGCACTCTGATC
GCCGCAGAAGCAGATCGCGTGACAAGGAACGCCGTCGTCGCAGCAGATCC
CGAGACAATCGCCGCAGAAGCAGGTCTCGCGAGGATCGCGATCGTGACAG
AGATCGACGCCACAAGAGTTCCAGCTCAAGAGATCACCACGAACGCCGAA
GACGAAGCCGATCTCGTTCCACAGAACGGAGAGATAGGAGAGATCGTTCG
AGGGACTGCAGTGAAAAGATGCCCCCACCATCTGCCGCCATGACCGATGA
TCCGGAGGCGGGCAAGATCTATTCCCGGCAAGATAGCTAATATTGTACCC
TTTGGGTTGCTTCGTACAGCTTTTTGGACTGCGGAAACGCTGGGAAGGCT
TAGTACACATCTCACACTAAGAGCAGAGGACGCGTGACAGATGTACGGAG
GTAGTCACTCGGAATCAGACTGTAAGTGAAAGTTATGTCATAACTGGTCA
AAAGTGTCCTGTTCGATGAGAGGTGGATCAGGGACCTCTGGAAGATCTTA
ATCCACTGTTCAACGCGCCCGAAGACGAGATGGATCTCATACAGAATCGG
AATTCGAGAGTGCTCCCCTT
UFO11369.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:39:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| pea-RA | 3898 | CG8241-RA | 96..1223 | 8..1128 | 5210 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:39:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14153248..14154375 | 8..1128 | 4945 | 97.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:39:19 has no hits.
UFO11369.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-23 10:28:37 Download gff for
UFO11369.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pea-RA | 86..1220 | 1..1128 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:23:18 Download gff for
UFO11369.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pea-RA | 89..1223 | 1..1128 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:35:25 Download gff for
UFO11369.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pea-RA | 89..1223 | 1..1128 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:35:25 Download gff for
UFO11369.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14153241..14154375 | 1..1128 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:23:18 Download gff for
UFO11369.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10040746..10041880 | 1..1128 | 97 | | Plus |
