UFO11371.5prime Sequence
1097 bp (966 high quality bases) assembled on 2012-04-23
> UFO11371.5prime
CAGTCGACATGACTTTTACGTATAAGGAACTCATAGATGTTGCCATTGGG
TCCCCGGAATCAGGACACGTTAACTTTTACGCTTTGCATGTCCTGCTCAC
GTGCTTTGCCCAGCGATTGGAGGTCCTCGATGAGGTTGTCGAGCAGGAAG
ACTATATGGTGGCCAATGTGCGCTTGCAAAGCAGTTTACTGACCTTGGGT
AACACCTCGAAGTTCCGTCTTTTCGCCGGTGCGGATGCCGAGGAGGGAGC
AGCAGCCGAGCCGGCGGCAGAGCCCCCAGCCGAGGAGGCAGAGGCACCCC
CTGCGCCAGTCGAAGAGCCTCCCGCAGCGGATCCAGCACCAGAGCCTGCT
CCAGAACCTGCTCCAGAGCCTGCTGCAGAGGAACCTGCCCCAGCGGAGCC
AGTCCCAGAAGAAGCAGCTCCTGCGGAGGCTGCCGCACCATCTCCAGAAC
CAGTGGGTTCCAACCATGAACCAACTCCATCTGCAACTCCGGCTCCCGAG
GAACATCCTCCTTCTGAGCCCGAGGCAGATACCTCAAAAGCACCAATGGA
TGTGCCTGCCGAGGCCAAGGGAGAGGAGCTGGCACCGCAGGCCTCACGGG
TCTCCTCGAGATCCTCCGGTCGCGACAAGTCGCACAGTCAAACGGACGGA
TCTCTTACCAATAATCTCTTGCGTCTCGAAAGACGCCTCTCCAAGATTGA
ACTGCAGAAGGAACAGGCCACAATGGAGGTTCAGCAGTTTGTGAGCAATC
TCACCAGCCCAGCTGAAGATCACGATGGAGCAGGTGAACAATATGACCCA
CTTGTTGATCGATCGCAAGCCGAACCCGCAGAGGTTTCGGTTACTCCGTC
ACATAGCCAGCAGTTGAGGGTCCTGATGGTGACGACTGGTGATGAGGTTT
CTGTGAGTGGTCGAGTGGGGATAAAGTGACGGTGTCGAAGAGGAGGGCTG
TCAGAGGAGGAGGTCCAGTGAGTCTAGTGCCGCCCCACGAGTGGAAAAGC
CTGAGGAAGAAGGAAGAACTTGAATTCACAGCCCCTTGCTATTCGCGGGA
AAATGCCTTACTGAACCTCTAGACTTCAAGTCGCCATCTGGTGCTTG
UFO11371.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:38:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10869-RA | 2227 | CG10869-RA | 120..1207 | 5..1084 | 4905 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:38:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 1585886..1586788 | 1084..190 | 3690 | 96.7 | Minus |
| 2L | 23513712 | 2L | 1586852..1587036 | 189..5 | 910 | 99.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:38:40 has no hits.
UFO11371.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-23 10:28:30 Download gff for
UFO11371.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10869-RA | 118..1197 | 1..1074 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:22:58 Download gff for
UFO11371.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10869-RA | 118..1197 | 1..1074 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:35:05 Download gff for
UFO11371.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10869-RA | 118..1197 | 1..1074 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:35:05 Download gff for
UFO11371.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 1586852..1587038 | 1..189 | 98 | | Minus |
| 2L | 1585896..1586788 | 190..1074 | 97 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:22:58 Download gff for
UFO11371.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 1585896..1586788 | 190..1074 | 97 | <- | Minus |
| arm_2L | 1586852..1587038 | 1..189 | 98 | | Minus |
