UFO11373.5prime Sequence
956 bp (916 high quality bases) assembled on 2012-04-23
> UFO11373.5prime
CAGTCGACATGTGGGAAAAGCTGGTGAACTGCATCAAGAGCAATGGTGGC
AATGGTGGCGTCAAGAATGTAAGCTGCCAAGTTGTCGAACTGGCGGATCT
GATGAAACAGGTGCCGCCGAACCAGATGCACAAGTTCAAAATGTTTGCCA
AGAAGCACGAGGAGTACAAGGACCGCGTTCGTAAGTATCCGGAATCGATG
CCGACAATCGACTGGGAATACTACCGTCAGAATGTGAGAGAAGAGTTTGT
CGATTGGGTGAAGGGATACGAGACCAAGTATGATAAATTGCATTCCGTAT
TCGAGAATCGACATGCCATAGTAGATCACAAGCGATACTTTGAACTCGTC
GATGAAGAAAAGAAGGTGGTGACAAAATGTATTAGCGAATACAAGGCGGA
GTCGGATAAAAGAATCCAGGAGCTAACCGAAAAGTTGGAGTTCGTGAAGG
CAATGCGACCCTATTCCGAAATGACCATGGAGGAATTTTGTTTTGCCCGT
CCGCACTTGGCACCCGATTTCATCAACAAGCCCACTTTCTGGCCACACAC
TCCTGAAGAGCAAATGCCAGGTCCATCGGATCCAGAGGCAGCAGCTGCTT
TGCATCACGAAGAGGAGCCCGAACCGCCAAAGAAACCAGCTCCCGAAAAG
TTACCAGATAAGCCTAGTGGAGAAGGAAAGCCTCCGGCGGCTGCGGCTCC
AAAGGAGCCAAAAGAACCCGTTGTCGACACCTCTCAGTTTGGCCGAAAAG
GCCACTTTAATCGCCAAAGATTTGATGGCCAAGCTATTGTTCTTTTTATT
AGTCTTAAAGAAAGATGTCGGGTCTGGGCCAAGAATGTTCAAAAAAGGCA
GACGCCGCCAAAGCTGCGCGTTTCGAAACTGCAGCAAATCCGCAACGTCT
ACAGCCGCACCAACCAAGTTCACTTGAACGAGCATTACGGAACGTAGAGT
TCTGGA
UFO11373.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:39:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7813-RA | 2375 | CG7813-RA | 81..1025 | 9..956 | 4425 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:39:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16498271..16499019 | 919..173 | 3410 | 98.8 | Minus |
| 2R | 25286936 | 2R | 16499186..16499349 | 172..9 | 820 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:39:35 has no hits.
UFO11373.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-23 10:28:40 Download gff for
UFO11373.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7813-RA | 78..1024 | 2..955 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:23:28 Download gff for
UFO11373.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7813-RA | 78..1024 | 2..955 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:35:33 Download gff for
UFO11373.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7813-RA | 78..1024 | 2..955 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:35:33 Download gff for
UFO11373.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16498240..16499019 | 173..955 | 98 | <- | Minus |
| 2R | 16499186..16499352 | 2..172 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:23:28 Download gff for
UFO11373.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12385745..12386524 | 173..955 | 98 | <- | Minus |
| arm_2R | 12386691..12386857 | 2..172 | 97 | | Minus |
